Methylococcus geothermalis: GNH96_10395
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Entry
GNH96_10395 CDS
T06585
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
metu
Methylococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metu03000
]
GNH96_10395
03036 Chromosome and associated proteins [BR:
metu03036
]
GNH96_10395
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_10395
Transcription factors [BR:
metu03000
]
Prokaryotic type
Helix-turn-helix
Other families
GNH96_10395
Chromosome and associated proteins [BR:
metu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GNH96_10395
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GNH96_10395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_50
Xre-like-HTH
HTH_30
HTH_1
HTH_23
HTH_17
RWP-RK
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QJD30342
UniProt:
A0A858Q8W5
LinkDB
All DBs
Position
complement(2233976..2234266)
Genome browser
AA seq
96 aa
AA seq
DB search
MRQDNRLLESFESPAMDHSHTTVVLSEQVRVALVNYLSQLDGINVTDMYTLVMAEVERPL
IRTVLEHCCHNQTRAAQVLGLSRSTLRKKMQQHGIE
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggataatcgattgcttgaatctttcgaatcgccggccatggatcattcccac
acgaccgtcgtactcagcgagcaggtgcgcgtggccttggtcaactatttgtcccaactg
gatggcatcaacgtgaccgacatgtataccctcgtcatggccgaggtcgaacggccgctc
atccgcaccgtcctcgagcactgctgtcacaaccagacccgcgcggcccaggttctgggc
ctcagccgcagcacgctgcgcaagaagatgcagcagcacggcatcgaatga
DBGET
integrated database retrieval system
