Methylococcus geothermalis: GNH96_11140
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Entry
GNH96_11140 CDS
T06585
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metu
Methylococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metu03016
]
GNH96_11140 (truB)
Enzymes [BR:
metu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GNH96_11140 (truB)
Transfer RNA biogenesis [BR:
metu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GNH96_11140 (truB)
Prokaryotic type
GNH96_11140 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QJD30476
UniProt:
A0A858Q9W7
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All DBs
Position
2404372..2405301
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AA seq
309 aa
AA seq
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MGLALTSPLSGILLLDKSSGLTSNRVLQCARRLFGVRKAGHTGSLDPLASGILPLCFNEA
TKLSGYLLDSDKRYRVLARLGATTHTGDADGEVLTRSAIPALDEPALLALLARFTGPILQ
VPPMFSALKHQGKRLYELARKGVEVERQARSVTIFGLALTGWGPDHLELDVHCSKGTYIR
TLVEDIGNAIGCGAHVEVLRRTAVAGFSVDQAVTLDELEAMTPAARLACLRPMDSMVPHW
PAVRLDAETSRLFLHGQAVAVTDAPCGDLLRVYDEEHAFLGIGCSDGHGRVAPRRVITPH
GGDVEPRSR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggcgttgacgagcccgctgtcgggaattctgctgctcgacaagagttcgggg
ctcacctctaaccgcgtcctgcaatgcgcccgtaggctgttcggcgtacgcaaggccggc
cataccggcagcctcgatcccctcgccagcggcatcctgccgctctgcttcaatgaggcc
accaagctgtccggctatctgctggattcggacaagcgctatcgcgttctggcccggctc
ggagccaccacccacaccggcgatgccgacggcgaggtgctgacgcggtctgcgatcccc
gccctcgacgaaccggcgcttctcgcgctcctggcgaggttcaccggtcccatcctgcag
gtgccgccgatgttttcggccctcaagcaccagggaaaacggctctacgaattggcacgc
aaaggcgtggaagtcgaacggcaggcgcgttcggtcacgatcttcgggctcgcactgacc
ggttggggtcccgatcatctggagctggacgtgcattgctccaagggcacctatatccgc
accctggtggaggatatcggcaacgccatcggttgcggcgcacatgtcgaagtgctgcgg
cggacggccgtcgccggattttccgtcgatcaagccgttaccctggacgaactggaagcg
atgacgccggcagccaggctggcatgcctgcgcccgatggacagcatggtgccgcattgg
cccgcggtgcggcttgatgccgaaacctcccggctttttctgcacggccaagccgttgcg
gtcaccgacgcgccctgcggcgatctgctgcgggtctatgacgaagaacacgcgtttctc
ggcataggctgcagcgacggtcatggccgggtggcacccaggcgcgtgatcaccccgcat
ggtggcgacgtggaaccaaggtctcgataa
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