Methylococcus geothermalis: GNH96_11150
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Entry
GNH96_11150 CDS
T06585
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
metu
Methylococcus geothermalis
Pathway
metu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNH96_11150 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metu03019
]
GNH96_11150 (pnp)
03016 Transfer RNA biogenesis [BR:
metu03016
]
GNH96_11150 (pnp)
Enzymes [BR:
metu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GNH96_11150 (pnp)
Messenger RNA biogenesis [BR:
metu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GNH96_11150 (pnp)
Transfer RNA biogenesis [BR:
metu03016
]
Prokaryotic type
tRNA degradation factors
GNH96_11150 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
S1_TP0910
KH-I_KHDC4-BBP
KH_SLS1_2
OB_PDCD11
MCRS_N
S1_2
Motif
Other DBs
NCBI-ProteinID:
QJD30478
UniProt:
A0A858Q9A2
LinkDB
All DBs
Position
2405703..2407778
Genome browser
AA seq
691 aa
AA seq
DB search
MNPIRKQFQYGDHTVSMETGEIARQADAAVMVDMAGTVVLVTVVGRKEASPHVDFFPLTV
NYQEKAYAAGRIPGGFFKREGRPSEKETLTARLIDRPIRPLFPDGFTHEVQVVATVMSLN
PEVDPDIPSMLGASAALTLSGLPFKGPIGAARVGFVNGAYVLNPDRSGMEASELDLVVAG
TANAVLMVESEARILPEEVMLGAVVFGHEQMQAAIRAINELAADVGVTAWDWAPPAVDTA
LAAAVDELARPALSEAYSIADKQIRQQKLKDARKSVIDALTAEGAYEENSVKRQIEKLEE
EIVRGNILRHGKRIDGRDLATVRPISIRTGILPRTHGSALFTRGETQAVVVATLGTGRDA
QLIDALEGEYKENFMLHYNFPPYCVGETGAIGSPKRREIGHGRLAKRGVQAIMPTMDEFP
YVIRIVSEITESNGSSSMASVCGSSLALMDAGVPTKGAVAGIAMGLILEGDEFAVLSDIM
GDEDHLGDMDFKVAGTRDGVTALQMDIKIDGITPEIMRQALHQARDGRLHILDKMAQSLP
APRNEMSDYAPRITSFTIDPSKIREVIGKGGATIRAITEETGTSIDITDDGVIKIASVDK
QAGLEARRRIEDITAEVEVGKVYEGKVARLMDFGAFVTILPGKDGLVHISQISDEHVEKV
SDKLAEGDVVRVKVLEIDRQGRVRLSMKAVD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccgatccggaagcaatttcagtacggcgatcataccgtctcgatggaaaccggc
gagatcgcccgtcaggccgacgccgcggtcatggtggacatggccggcaccgtggtgctg
gtcaccgtcgtggggcgcaaagaggcgtctccccacgtcgatttcttccccctcaccgtc
aattatcaggaaaaggcctacgctgccggacgcattccgggcggtttcttcaagcgggaa
ggacgtcccagcgaaaaggaaacgctgaccgcccgcctgatcgaccggcctatccggccc
ctgttcccggacggattcactcacgaagtccaggtcgtcgccaccgtcatgtcgctgaac
ccggaagtggacccggacatcccgtccatgctcggcgcatcggccgcgctgacgctgtcc
ggcctgcccttcaagggtccgatcggcgcggcccgggtcggtttcgtgaacggcgcctat
gtcttgaacccggacagatccggcatggaagcttccgaactcgacctcgtggtggcgggt
accgccaacgccgttctcatggtcgaatcggaagcgcggatactccccgaggaagtcatg
ctgggcgcggtcgtcttcggccacgaacagatgcaggcagccatccgggccatcaacgag
ttggccgccgatgtcggcgtcaccgcctgggactgggcgccacctgccgtagacacggcg
ctggccgcggccgtcgacgaactcgcccggcccgcattgtcggaagcctacagcatcgcc
gacaagcagatccgccagcagaagctcaaggacgcccgcaagagcgtgatcgatgccctc
accgccgagggcgcctacgaggaaaactcggtaaaacggcagatcgaaaagctggaagaa
gagatcgtccgcggcaacatcctccgccacggcaagcggatcgatggacgcgacctcgcc
acggtccgtcccatcagcatccgcaccggcatcctgccgcggacccacggttcggccctg
ttcacccgcggcgaaacccaggccgtggtcgtcgcgactctgggcaccggccgcgatgcg
cagctcatcgacgcgctggagggtgagtacaaggaaaacttcatgctgcactacaacttc
ccgccttactgcgtgggtgaaaccggcgccatcggctcgcccaagcggcgcgagataggc
catgggcgcctggccaagcgcggggtgcaggcgatcatgccgacgatggacgaattcccc
tacgtcatccgcatcgtctcggaaatcaccgaatcgaacggctccagctccatggcctcg
gtctgcggcagcagcctggcactgatggatgccggcgtgccgaccaagggcgccgtggcc
ggcatcgccatgggcttgatcttggagggcgacgaattcgccgtgctttcggacatcatg
ggcgacgaggaccatctgggcgacatggatttcaaggtggccggcacccgcgacggcgtc
accgcgctgcagatggatatcaagatcgacggcatcacgccggagatcatgcgtcaggcg
ctgcatcaagcccgtgacggacgcctgcatatcctcgacaaaatggcgcaatccctgccg
gcgccgcgcaacgaaatgtccgattatgcgcctcgcatcaccagtttcaccatcgacccc
agcaagatacgggaagtgatcggcaagggcggcgcgaccatccgcgccatcaccgaagag
accggcaccagcatcgacatcaccgacgacggcgtcatcaagatcgcctcggtcgacaag
caggccggtttggaagcacgccgccggatcgaggacatcacggcggaagtcgaggttggc
aaggtctacgaaggcaaggtggcacggctcatggacttcggagcgttcgtcaccatcctg
ccgggcaaggacggactggtgcacatatcccagatttccgacgagcatgtggagaaagtc
agcgacaagctggcggaaggcgatgtggttcgcgtcaaggtgctggagatcgaccgccag
ggccgggtccggctcagcatgaaagccgtcgactga
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