Methylococcus geothermalis: GNH96_11295
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Entry
GNH96_11295 CDS
T06585
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
metu
Methylococcus geothermalis
Pathway
metu00521
Streptomycin biosynthesis
metu00523
Polyketide sugar unit biosynthesis
metu00525
Acarbose and validamycin biosynthesis
metu00541
Biosynthesis of various nucleotide sugars
metu01100
Metabolic pathways
metu01110
Biosynthesis of secondary metabolites
metu01250
Biosynthesis of nucleotide sugars
Module
metu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GNH96_11295 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GNH96_11295 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GNH96_11295 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GNH96_11295 (rfbB)
00525 Acarbose and validamycin biosynthesis
GNH96_11295 (rfbB)
Enzymes [BR:
metu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GNH96_11295 (rfbB)
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Ortholog
Paralog
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QJD30502
UniProt:
A0A858Q9B1
LinkDB
All DBs
Position
complement(2441971..2443044)
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AA seq
357 aa
AA seq
DB search
MKTLLVTGGAGFIGGNFVLRQMRQGGVEVVNLDALTYSGNLRTLAEVEDNPNHDFVLGSI
GDRELVEYLLERYQPDAIVNFAAETHVDRSIDGPDAFVHTNVTGTFELLEAARWYWRQLD
GERRKTFRFLHVSTDEVYGTLGPTGKFTEETPYRPNSPYSASKAGSDHLVRAYFHTYGLP
VLTTNCSNNYGPYQFPEKLIPLMIDHALQGLPLPVYGAGTNVRDWLYVEDHCRAIETVLA
GGRPGEVYNVGGNNEKTNIEVVETICALLDEFLPDSPHKPHRHLIQFVQDRPGHDLRYAI
DAGKIGRELAWQPEETFETGLRKTVRWYLDNRDWVEHVKSGNYGGERLGVESAKESE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaccctactcgttaccggcggtgccggattcatcggcggcaatttcgtgctcagg
cagatgcggcagggcggcgtcgaggtcgtcaacctcgatgcgctgacctattccggcaat
ctgcgtaccctcgccgaagtcgaggacaatccgaaccacgacttcgtgctgggctcgatc
ggcgaccgcgagctggtcgaatacctgctggagcgctatcagccggacgcgatcgtcaat
ttcgccgcggagacccacgtcgatcgctcgatcgacggcccggacgctttcgtccatacc
aacgtcaccggcactttcgaactgctggaggccgcgcgctggtactggcgccagctggac
ggcgaacgccggaagacgttccggttcctgcatgtctccaccgacgaggtctacggtacc
ctgggcccgaccggcaagttcaccgaggagacgccgtaccggcccaactccccgtattcg
gcgtccaaggccggctccgaccacttggtgagggcctatttccacacctacggcctgccg
gtgctgaccaccaactgctcgaacaattacgggccgtaccagtttccggagaaattgatt
cccctgatgatcgaccacgcgctccagggtctgccgctgccggtgtacggcgcgggtacc
aacgtccgcgactggctctacgtggaagaccattgccgggcgatcgagaccgtcctggcc
ggcggccggccgggcgaggtctataatgtcggcggcaacaacgagaagaccaacatcgaa
gtggtggagacgatctgtgccctgctcgacgaatttctgcccgattccccccacaaaccg
caccgccacctgatccagttcgtgcaggaccggcccggccacgacctgcgctacgccatc
gacgccggcaagattggccgtgaactggcctggcagcccgaagaaaccttcgagaccggc
ctgcggaagacggtgcgctggtacctcgacaaccgcgactgggtggagcacgtcaagtcg
ggcaactacggtggcgagcgtctgggcgtcgaaagcgccaaggagtcggaatga
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