Methylococcus geothermalis: GNH96_14540
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Entry
GNH96_14540 CDS
T06585
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
metu
Methylococcus geothermalis
Pathway
metu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GNH96_14540 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metu03021
]
GNH96_14540 (rpoA)
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_14540 (rpoA)
Enzymes [BR:
metu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GNH96_14540 (rpoA)
Transcription machinery [BR:
metu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GNH96_14540 (rpoA)
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GNH96_14540 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QJD31477
UniProt:
A0A858QC08
LinkDB
All DBs
Position
complement(3129022..3130008)
Genome browser
AA seq
328 aa
AA seq
DB search
MHNSLAELIKPRTVEVVPHGANSARVVIEPLERGFGHTLGNALRRVLLSSIPGAAVTDVV
IDGVLHEYSTIEGVQEDVIDVLLNLKNLAIRLNGPHDVYLNIDKQGPGQVLAGDMEIPHD
VEVLNPDLLIAHVTGSSRLRMTLHVQKGRGYQPVANRAVEGDSAIGTLHVDASFSPIKKV
SYVVESARVEQRTDLDRLVIELQTNGTVQPEEAVKHAANILNQHLGILVDLKGEDLPLFG
EDGPQFDPLLLHPVDDLELTVRSANCLKAENIFYIGDLIQRSEADLLKTPNLGKKSLTEI
KDVLATKGLSLGMRLENWPPEGLKKPNQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacaactcgcttgccgagctgatcaagccgcgcacggtggaggttgttcctcacggg
gcgaactccgcacgtgtggtgatcgaaccgctggagagagggttcggccacactctgggc
aacgccctgagacgcgtgcttctttcttccattccaggagcggcagtgacggacgtcgta
atcgacggcgtgctgcacgagtattcgaccatcgagggggttcaggaggacgtgatcgac
gtgcttttgaacttgaagaacctcgctattcggctcaacgggcctcacgacgtttatctg
aacatcgacaaacaggggcccggacaggttttggcgggagacatggaaatccctcacgat
gttgaggtgctcaatccggatttgctgattgcacatgtgaccggcagcagccgtttgcgc
atgacgctccacgtgcaaaaggggcggggttaccagcccgttgccaatcgcgccgtggaa
ggtgattcggcgatcggtacgctgcatgtcgatgcgagcttcagtccgatcaaaaaggtg
tcttatgtagtcgagagcgcccgggtcgagcaacgcaccgatctcgaccggctggtcatc
gagctccagaccaacggtacggttcagcccgaggaagcggtcaagcatgccgccaacatc
ctgaatcaacatctcggcattctcgttgacctgaaaggcgaggacctgccgctgttcggg
gaggatgggccccagtttgatccgctgttgctgcacccggtggatgatcttgagctcacc
gttcgctccgcgaattgtctgaaagccgagaacatcttttatatcggtgacctgattcag
cgtagcgaagcggatttgctcaagacgcccaacctgggaaaaaagtcgctcacggaaatc
aaggacgtcttggcgacgaagggcttgtctttgggcatgcgcctggagaactggccgccg
gaaggtctcaagaagccgaatcaatag
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