Methanobrevibacter sp. TLL-48-HuF1: K4897_00980
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Entry
K4897_00980 CDS
T08254
Name
(GenBank) DEAD/DEAH box helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metv
Methanobrevibacter sp. TLL-48-HuF1
Pathway
metv03420
Nucleotide excision repair
metv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K4897_00980
03430 Mismatch repair
K4897_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metv03400
]
K4897_00980
Enzymes [BR:
metv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K4897_00980
DNA repair and recombination proteins [BR:
metv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K4897_00980
MMR (mismatch excision repair)
Other MMR factors
K4897_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
DEAD
AAA_11
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
URN49607
UniProt:
A0A9E7IV73
LinkDB
All DBs
Position
202399..204858
Genome browser
AA seq
819 aa
AA seq
DB search
MISYEEFEDIVVNTLKRNISSNKDQKKAISSDANDSLFIVAGPGSGKTTVIVLKILKYIF
VDDIAPDEILATTFTRKAANELHSRILSWGDQIKNYLLENIVEDDPIKELELMNFIEKKI
DLNKINIGTTDSVAEDLLRIHREPGTNQPLVIEEFVTKSAMTNILLKDNRYLNENLKEYL
KSFTPKEKLEEPSKMAEIILNMKNRMYYDQVNFDEIYDKFEKGSGANLTLNCIKDYEAEL
QNRNIIDFPMLESKFLNKLKNHKLDIFLDSIKIILIDEYQDTNLIQEDIYFTIAQSALKN
NGSITVVGDDDQSLYRFRGATVDLFTNFKKRAHDKLGIDVKEINLRTNYRSSENIISHCN
HFVELDKEYQKARVDEKPKIIAPDFDKDKIPVLGMFRNNPEMLAKDLTQLINNLINNGET
SLKIRRVLNKDYYNTLNGNSNLQIINKQKQNNAKKSKNLENITLKLDEEYGSASDIAILS
YSPKEMKGSTPTFNYYLRKNLKKLRKPIEVFNPKGRDLQDIKSVAIFCGLILECIDPQGI
IQKSDKQIQNLANRNMTRWRYRAIDYIKLKPEPNEPVSLSEFVISWQNRHPKNRDKWPES
ASLMELAYKLTTWIEDLQEDVEGIVYLEAITRSIKQTGFFNKYSGNIVFTNSKTERESVL
EAIWNIFIPIATGGVGIDEDLLETLPDDRINIMSIHQSKGLEFPLVIVDVGSKFKKNTFN
TQNLRFPKIEPENRSIEDSIRCFSSLGESQRSEKDRSFDDLTRLYFVAFSRAENVLLLIG
LISSLDGYSVNNNLKQIPNVALGWSRDEKLVGFDEIYLI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgattagttatgaagaatttgaggatattgttgtaaatacactaaaaagaaacatttct
tcaaataaagatcaaaaaaaagccatttcatctgatgcaaatgactccctttttatagta
gcaggccccggatctggaaaaactactgtaattgtacttaaaatacttaaatatattttt
gttgatgatattgctccagatgaaattttagcaactactttcaccagaaaagcagcaaac
gagttacattcacgtattttaagttggggagatcagattaaaaactatcttttagaaaat
attgttgaagatgaccctattaaagaactggaattaatgaatttcattgaaaaaaagata
gacttaaacaaaatcaatattggaactactgacagtgtagctgaagatttgctgagaatt
catagagagcccggaacaaatcagccattagtaattgaagagtttgttacaaagtcagct
atgacaaatattcttcttaaagacaacagatacttaaatgaaaatttaaaggaatatctt
aaaagttttacacctaaagaaaagctggaagaaccttcaaaaatggcagaaatcattttg
aatatgaaaaatagaatgtactatgaccaggtgaactttgatgaaatctatgataaattt
gaaaaaggcagcggagctaacttaactcttaactgtataaaagattacgaagcagaactg
caaaatagaaacattatagatttcccgatgctcgaatccaaattcttaaacaaacttaaa
aatcataaactggacatttttttagacagtataaaaatcattctaattgacgaatatcag
gacaccaatctgattcaggaagatatttactttacaatagcccagtctgccctaaaaaac
aacggcagtataactgttgtaggtgatgatgaccaatctctctatcgttttagaggagct
actgtagatttgtttacaaatttcaaaaaacgtgcacatgacaaattaggaattgatgtt
aaagagattaatttaagaaccaactacaggtccagtgaaaatattatcagtcactgcaat
cattttgtagaactagacaaggaatatcaaaaagcaagagtagatgaaaaacctaaaatc
attgctcctgattttgataaagataaaatacctgttttaggaatgtttagaaataaccct
gaaatgttagctaaagatttaactcagctaattaataatctcataaataatggagaaaca
tcactgaaaatcagaagagtattaaataaagattattataatacattaaatggcaattca
aacttacaaatcattaacaagcaaaaacagaataacgctaaaaaaagcaaaaatttagaa
aatattacattgaaattagatgaagaatacgggtctgcatcagatatagctattttatca
tattctcctaaagaaatgaaaggaagcactccaacatttaattattacttaagaaaaaat
cttaaaaaactcagaaaacctattgaagttttcaatccaaaaggaagagacctgcaagat
ataaaatcagttgcaatattttgcggattgattttagagtgtattgatcctcaaggcata
atccaaaaatcagataaacaaatccagaatttagctaatagaaacatgacccgctggaga
taccgagcaatagactacattaaattaaaacctgaacctaatgaacctgtttcactgtct
gaatttgtaatttcctggcaaaaccgccaccctaaaaatcgtgacaaatggcctgaaagt
gctagtctgatggaactggcttataaattaactacctggattgaagaccttcaagaagat
gttgaaggaatcgtgtatctggaagctattacaaggtcaattaagcaaacaggatttttc
aataagtattccggaaatattgtatttaccaattcaaaaaccgaaagagaatcagttctt
gaagctatctggaatattttcattccaatagctaccggaggagttggaattgacgaagac
cttcttgaaacactgcctgatgacagaataaatataatgtctattcatcaatctaaagga
ctggaatttccattagtaattgttgatgtcggcagcaaatttaaaaagaacactttcaat
actcaaaacttaagatttccaaaaattgaacctgaaaacagaagtattgaagacagtata
cgttgtttcagctctcttggagaatcacaaagaagtgaaaaagacagatcctttgatgat
ttgacaagactttattttgtggcattttccagagctgaaaatgttctgctgcttattgga
ttaatatcttcccttgacggatattcagttaacaataatcttaaacaaattcctaatgtt
gcacttggctggagcagagatgaaaaattagttggatttgatgaaatatatctaatataa
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