Methanobrevibacter sp. TLL-48-HuF1: K4897_02635
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Entry
K4897_02635 CDS
T08254
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
metv
Methanobrevibacter sp. TLL-48-HuF1
Pathway
metv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
metv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K4897_02635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metv03021
]
K4897_02635
Transcription machinery [BR:
metv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K4897_02635
Prokaryotic type
Archaeal type
TFB
K4897_02635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
UPF0181
Cyclin_C
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
A2L_zn_ribbon
Cas12f1-like_TNB
Ribosomal_S27e
DZR
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
URN49910
LinkDB
All DBs
Position
complement(541285..542217)
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AA seq
310 aa
AA seq
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MQGDVYDKDKQTVCPECGSTELIGDYERAEVVCAHCGLVIDENLVDMGPEWRAFDHEQRD
KRTRVGAPITYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRLRKWQRKIRISGATER
NLAFALSELDRDSSRLGLPRSVREAASVVYRSAVDNKLIRGRSIEGVVAASLYAACRRCN
VPRTLDEIAEVSRVTKKEVGRTYRFLTRELNIKLPPTSPVDYVPRFASELGLSGEAQSRA
IEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRDVADIAGVTEVTIRNRYKEL
TEQLEMGVTL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtgatgtctatgataaagataaacagactgtatgtccagaatgtggttccaca
gaattaattggtgattatgaaagagcagaagtagtttgtgctcactgtggattagttatt
gatgaaaatcttgtggatatgggtcctgaatggagggcttttgatcacgaacaaagagat
aaacgtactagggttggagctccaattacttacaccattcacgataaaggtttaagtact
atgattgattggaggaataaagacatttatggtcgcgatattcctgcaagaaatagggca
caatggtatagattaaggaaatggcaaagaaaaattaggatttctggtgctacagaacgt
aacttggcatttgcattaagtgagttagacagagattcttcaagattaggtcttccaaga
agtgtgagggaagctgcatctgtagtatacagaagtgcagtagataacaaacttattcgt
ggaagaagtattgaaggagtagttgctgcttctttatatgctgcttgtagacgttgtaat
gttccccgtactttagatgaaatagctgaagtttcaagagttactaaaaaagaagtaggt
aggacttataggttccttacaagagaattaaacattaaattaccgccaacttctccagta
gattatgtgcctagatttgctagtgaattaggtttatctggtgaagcacaatccagagct
attgaaattattgaaaaagcaatggaaaaaggtttaacttctggtagaggaccaactggt
gtagctgcggctgcattgtatattgcatctgttttattaggtgaaagaaaaactcaaaga
gatgtagcagatattgcaggtgttactgaagtaactataagaaacaggtataaagaatta
acagaacaacttgaaatgggtgtaactttataa
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