Methanobrevibacter sp. TLL-48-HuF1: K4897_03780
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Entry
K4897_03780 CDS
T08254
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
metv
Methanobrevibacter sp. TLL-48-HuF1
Pathway
metv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
metv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K4897_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metv03019
]
K4897_03780
03009 Ribosome biogenesis [BR:
metv03009
]
K4897_03780
04131 Membrane trafficking [BR:
metv04131
]
K4897_03780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metv04147
]
K4897_03780
Messenger RNA biogenesis [BR:
metv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K4897_03780
Ribosome biogenesis [BR:
metv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K4897_03780
Membrane trafficking [BR:
metv04131
]
SNARE
SNARE associated proteins
Others
K4897_03780
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K4897_03780
Exosome [BR:
metv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K4897_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
AAA_2
RuvB_N
AAA_33
CDC48_2
AAA_14
TIP49
AAA_22
AAA_5
AAA_lid_PRS2_C
nSTAND3
AAA_28
AAA_3
NPHP3_N
Mg_chelatase
RNA_helicase
ATPase
Sigma54_activat
AAA_17
AAA_24
AAA_7
ABC_tran
SLFN-g3_helicase
Zeta_toxin
IstB_IS21
NB-ARC
DUF815
Viral_helicase1
Parvo_NS1
Bac_DnaA
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
URN50122
UniProt:
A0A9E7IQ22
LinkDB
All DBs
Position
772401..774593
Genome browser
AA seq
730 aa
AA seq
DB search
MAQNEITLKVAEALSQRDIGQGIARLDPKTMNDLGINERDLIEITGDKKTAAIALPSQTD
IGLGVIRIDGLVRKNSGATIGGEVTIKKAQAIEAKKVVLAPTENNIRVQGDVRGLFQGKA
MVQGDIIGSQIRTRPASMGMGFDSIFNDLMDFSPMKEIKFAVVSTKPAGIVVVGPNTEVE
LHESPVDVSNIEGVTNLVDVSYEDIGGLKEEVKKVREMIEIPLKRPELFDKLGIAPPKGV
LMHGPPGTGKTLLAKAVASESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEENAPSII
FIDELDAIAPKREDTQGETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQALRRPG
RFDREIEIGVPDAEEREEILEIHTRNMPLAEDVDLHKIAGTTHGFVGADLESLCKEAAMR
VVRRIIPEIKNDEEIPEEVLKKIVVTSDDFKSALKEIQPSALREVLVQVPDVKWDDVGGL
DDVKQELKEAVEWPLKHPEKFEKFGVRPPKGTLLYGVPGTGKTLLAKAVASESEANFISV
KGPELLSKWVGESEQGVREVFRKAKQTAPTVIFFDEIDSIASTRSANDSDSGVTKRVVNQ
LLTEMDGLEELEDVAIIAATNRPDILDAGLMRPGRFDRHIKVDLPNEEARLSIFKVHTEG
MPLADDVSLEKLAKQTDGYVGADIEAVCREAAMLTLRNDLDAENVPNKYFKEALEKVKPS
NNPGDQVQYI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaatgaaattactttaaaagtagctgaagctctttcacaaagagatattggt
caaggaatcgcaagattagacccgaaaactatgaatgatctcggaattaatgaaagagac
cttattgaaattactggtgataaaaaaacagcagcaattgccctaccttcacagacagac
attggtcttggagtaataagaattgatggattagttcgtaaaaactcaggagcaaccatc
ggcggggaagtaactattaaaaaagcacaagctattgaagctaaaaaagttgttcttgca
ccaactgaaaataacattcgtgtacaaggagatgtacgtggattattccaaggaaaagca
atggttcaaggagatatcataggatctcaaatcagaacccggccagcaagtatgggaatg
ggctttgacagcatatttaacgatttaatggatttctcaccaatgaaagaaattaaattt
gctgtagtatctaccaaacctgcaggaatcgttgtagttggaccaaatacagaagtagaa
ttacatgaaagtccagtagatgtatccaacatcgaaggtgtaactaatttagttgatgta
agctatgaagatatcggtggtcttaaagaagaagttaaaaaagtcagagaaatgattgaa
attcctcttaaaagaccagaactctttgataaattaggaattgcacctccaaaaggagta
ttgatgcacggaccaccaggtacaggaaaaacattactggctaaagctgtagctagtgaa
agtgatgctcatttcattgcaataaatgggcctgaaatcatgagcaaatatgtcggcgga
tctgaagaaaacttaagggaatactttgaagaagcagaagaaaacgctccatcaatcata
ttcattgatgaattagatgctattgctccaaaaagagaagatactcaaggtgaaactgaa
agaagaacagtagctcaacttttaaccttaatggacggtcttaaatccagaggccaagtt
gttgttatcggtgcaactaacaggccagattctcttgatcaagcattaagaagacctgga
agattcgaccgtgaaattgaaattggtgttcctgatgctgaagaaagggaagaaatcctt
gaaattcataccaggaatatgcctcttgcagaggatgtagacttacataaaatagccggt
acaactcacggattcgtaggagcagacttggaatcattatgtaaagaagcagcaatgaga
gtagtcagaagaatcattcccgaaatcaaaaacgatgaagagattccagaagaagttctt
aaaaaaattgttgttacaagcgatgacttcaaatcagctttaaaagaaattcaaccttct
gcattaagggaagttcttgtacaagttcctgatgttaaatgggatgacgtaggtggactt
gatgatgtcaaacaagagttaaaagaagctgttgaatggccattaaaacatcctgaaaaa
ttcgaaaaattcggtgtaagaccaccaaaaggaaccctgctttacggagttccaggtaca
ggaaaaacattacttgcaaaagcagtagctagtgaaagtgaagccaatttcatctcagtt
aaaggtcctgaactgctatcaaaatgggtgggagaatctgaacaaggtgtaagagaagta
tttagaaaagcaaaacaaactgcacctactgtaatattcttcgatgaaatcgattcaatt
gcaagtacccgtagtgcaaatgacagtgacagtggagtaactaaaagagtagtaaaccaa
ttattaactgaaatggacggtttagaagaacttgaagacgttgcaatcattgcggcaacc
aacagaccggacatattggatgcgggtttaatgagaccaggaagatttgacagacatatc
aaagttgatttaccaaatgaagaagccagattatctatcttcaaagtacatactgaaggt
atgccattagctgatgatgtaagtcttgaaaaattagctaaacaaactgacggatatgtc
ggagcagatattgaagcagtatgccgtgaagcagcaatgttaactttaagaaatgacctt
gatgctgaaaatgtacctaacaaatacttcaaagaagctcttgaaaaagtcaaaccgtct
aacaatcctggagaccaggttcaatacatttag
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