Methanobrevibacter sp. TLL-48-HuF1: K4897_04665
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Entry
K4897_04665 CDS
T08254
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
metv
Methanobrevibacter sp. TLL-48-HuF1
Pathway
metv03030
DNA replication
metv03420
Nucleotide excision repair
metv03430
Mismatch repair
metv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K4897_04665
03420 Nucleotide excision repair
K4897_04665
03430 Mismatch repair
K4897_04665
03440 Homologous recombination
K4897_04665
03460 Fanconi anemia pathway
K4897_04665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metv03000
]
K4897_04665
03032 DNA replication proteins [BR:
metv03032
]
K4897_04665
03400 DNA repair and recombination proteins [BR:
metv03400
]
K4897_04665
Transcription factors [BR:
metv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
K4897_04665
DNA replication proteins [BR:
metv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
K4897_04665
DNA repair and recombination proteins [BR:
metv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
K4897_04665
MMR (mismatch excision repair)
K4897_04665
DSBR (double strand breaks repair)
HR (homologous recombination)
K4897_04665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Rep_fac-A_C
OB_MEIOB_N
tRNA_anti_2
Zn_Ribbon_TF
POT1PC
SHLD2_OB1
Zn_ribbon_6
DUF5088
Motif
Other DBs
NCBI-ProteinID:
URN50287
LinkDB
All DBs
Position
complement(972948..975329)
Genome browser
AA seq
793 aa
AA seq
DB search
MDNEILELYEQVKDKLTMEEFQAKINDISKENEDLGFVDDYYAAEQVVNNILGASKDDQK
SNGEILDIGDLEPGSQPAIVGMINSISNPKSFKTRKGKSGQVCNMELKDNTGEIRVVLWT
ENIKLLKNFKEGNIVKITDVDIKEGYRGDNEANLRPRSTITHFKEADLSKFPTYEENITD
IEDLVPDTKANIIARIIRIPTPRTYEKDGKEGKVASLELKDATGEISYTLWNKNVDLIEE
LGLDAGDSVKILSAQVRERNGELSLTHWDGRIIKGDFDVPEFSQEFIKIGNITEQSNIAI
KGVISKLQDVRTFTRKSDGSEGKLRNFDVTDDTGSIRTTIWGHDTDILLTKGDIVKIIGA
DARFDDYTDSGYSLNTNFNTQISINPENLSDEELDIFNEIKQKVSQIKRLSEVEEYDEDG
IEVDVIGRMFAIGEINEFQRDDGSVGYARSAKFSDGEGRVNLTFWDQKAKQEYKPGGAYK
IENAKVRLGMYEVELNIGTSARVMELPEDSDQARFLPSFKTIEAMIYTHKSISDVEEDDE
NLIVMGRIIDASNTREFDRDDGTKGYVKSLEIADNSGSINVTLWNEYAKKDWNVGDAIKF
QDPQISFRNDSLEINVSRSTSILEPDESEINDLPTYDELKESIYVPKTIEALEDDDRNVR
ITGTLKEVFGNKILITKCPNCGNTVNQSSEDFVCEFCGEAVDEPKYLLMIPARLEDDTGE
ISITFFDNLAEELLDMKKEEIINLTDDGSDLGPMEGRIDDLNGLTVEVITNVSFDDYNEE
IRLNPKRILSKYY
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggataatgaaattttagaattatatgaacaagtcaaagataaattgacgatggaagaa
tttcaagcaaaaataaatgatatttctaaagaaaacgaagatttaggttttgtggatgat
tattatgctgctgaacaggtggtaaacaatatacttggagccagtaaagatgaccaaaaa
tccaatggtgaaattttggatattggtgatttggaacctggatcccaaccagctattgtt
ggaatgattaacagtatctcaaatccgaaatcttttaaaacccgtaaaggtaaatctgga
caagtctgtaatatggaattaaaggataacactggtgaaattagagtagtgttatggaca
gaaaatattaaacttcttaaaaactttaaagaaggaaacattgttaaaattactgatgtt
gatataaaagagggttataggggagataatgaagctaatttaagacctagatcaactata
actcattttaaagaagcagatttatcaaaattcccgacatacgaggagaatataactgat
attgaagaccttgttcccgatacaaaagcaaatattattgctagaattataagaattcca
actccaagaacttatgaaaaagatggaaaagaaggaaaagtcgcttctcttgagctaaaa
gatgcaactggtgaaatatcttataccttgtggaataaaaatgttgatttgattgaggaa
ttaggtttggatgccggagattctgtaaaaatcttaagtgcacaggtaagagaaagaaac
ggggaattgtcattaactcattgggacggtaggataatcaaaggagattttgatgttccc
gaattcagtcaggaatttattaaaattggaaatattacagagcaaagtaatatagctatt
aagggagttatttctaaattgcaagatgtcagaacattcacaagaaaatctgatggctct
gaaggtaaattaagaaactttgatgttacagatgatacaggttctattagaactaccata
tggggacatgatacagatattttgttaactaaaggagacattgtcaagattataggtgct
gatgctcgttttgatgattatactgacagtggatattcacttaatacaaatttcaacact
caaatttcaataaatcctgaaaacctgtctgatgaggaattggatatctttaatgaaatc
aaacagaaagtttctcaaattaaaagacttagtgaagttgaagaatatgatgaagacgga
attgaagtcgatgttataggaagaatgtttgctattggagaaataaacgagtttcaaaga
gatgatggcagtgtaggatatgcacgttcagctaaattttctgacggtgaaggacgtgtt
aatttaacattttgggatcagaaagctaaacaggaatacaaacctggcggagcatacaaa
attgaaaatgcaaaggttagattgggaatgtatgaagtcgaattaaacattggaacttct
gcacgcgtaatggaattgcctgaagacagtgaccaagcaagattcttaccgtcatttaaa
actattgaagcaatgatttatactcataaatcaatatctgatgttgaagaagatgatgaa
aatcttattgttatgggtagaataattgatgcaagcaatactcgtgaatttgatagagat
gatggaactaaaggatatgttaaatctttagaaatagctgataattctggttctatcaat
gttactttatggaatgaatatgctaaaaaagattggaatgttggagacgctattaagttc
caggatcctcaaatttcatttagaaatgacagtttggaaattaatgtatcaagatccact
tctattcttgaacctgatgaatcagagattaatgatttgccaacttatgatgaattaaaa
gaatcaatttatgttcctaaaaccattgaggctttagaagatgatgacagaaacgttcgt
ataactggtactcttaaagaagtatttggcaataaaatattaattacaaaatgtcctaac
tgtggaaatactgtaaatcagtcatcagaggattttgtctgtgaattctgcggagaagct
gtagatgaacctaaatatcttttaatgattccggcaagacttgaagatgacactggcgaa
atttcaattactttctttgataacctggctgaagaacttcttgacatgaaaaaagaagaa
ataattaatcttactgatgatggttccgatttaggacctatggaaggtagaatagatgat
ttaaacggtttaactgttgaagttattactaatgttagttttgatgattataatgaagaa
attaggcttaatcctaaaagaattttatctaaatattactaa
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