Methanobrevibacter sp. TLL-48-HuF1: K4897_07850
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Entry
K4897_07850 CDS
T08254
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metv
Methanobrevibacter sp. TLL-48-HuF1
Brite
KEGG Orthology (KO) [BR:
metv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metv03016
]
K4897_07850
Enzymes [BR:
metv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K4897_07850
Transfer RNA biogenesis [BR:
metv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K4897_07850
Prokaryotic type
K4897_07850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
GnsAB_toxin
Motif
Other DBs
NCBI-ProteinID:
URN49196
LinkDB
All DBs
Position
1647319..1648281
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AA seq
320 aa
AA seq
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MKDFLTKSKSFTNPEYGCAPEEREISDYISHGVINLDKPSGPTSHEIDSWVKRILNLEKS
GHGGTLDPKVTGVLPVGLGDATRAIQLLLTAPKEYVCVMTFHHDVDEDKIREVFNEFTGK
IFQLPPVKSAVKRELRSRNVYYSTIYEINGRDVLFRIGCEAGTYVRTYCHNIGEAIGVGA
HMAELRRTQVGSFTEDNHLSTLQDVTDAYHFYKEDEDESFLRNAIMPMERAADYLPKVVI
KDSAVDAICHGANLASGGIAYLSDNIQKNSIVAIETLKGELVASGNSLFSSDEILNLESG
FAVNVSKVFMKTDIYPKMWK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactttcttacaaaatccaaaagttttacaaatcctgaatacggatgcgctcct
gaagaacgtgaaatttcagattatatttctcatggtgttattaatttagacaaaccctct
ggaccaacttctcatgaaattgattcatgggtaaagcgtattttaaatttggaaaaatca
ggacacggcggaactttggatccaaaagttacaggtgttttgcctgtagggcttggagat
gcaacaagagctattcaacttcttttaacagctcctaaagaatatgtttgtgtaatgact
tttcatcatgatgtggatgaggataaaattcgtgaagtatttaatgagtttaccggtaaa
attttccagcttcctccagttaaatcagcagttaaacgtgaattaagatctcgtaatgtt
tattattccaccatctatgaaattaatggtagggatgttttatttaggataggctgtgaa
gctggaacttatgttagaacttattgtcataatataggtgaagccattggtgttggtgcg
catatggcggagcttagaagaacacaggtaggttcatttacagaagataatcatttatcc
actcttcaggatgttactgacgcatatcatttctacaaagaagatgaagatgaatcattt
ttaagaaatgctattatgccaatggagagggctgcagattacctgccaaaagtagttatt
aaagattctgcagttgatgcaatctgtcatggtgctaacttagccagtggcggaatagct
tatttatctgataatattcaaaaaaattccatagtagctattgaaacacttaaaggtgaa
ctggttgcttcaggtaattctttatttagcagtgatgagattttaaatttggaatccggg
tttgctgttaatgtttctaaagtttttatgaaaacagatatttatcctaaaatgtggaaa
taa
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