Methanosarcina sp. 795: AAY43_02005
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Entry
AAY43_02005 CDS
T10855
Name
(GenBank) CdcH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
metw Methanosarcina sp. 795
Pathway
metw04141
Protein processing in endoplasmic reticulum
Brite
Messenger RNA biogenesis [BR:
metw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AAY43_02005
Ribosome biogenesis [BR:
metw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AAY43_02005
Membrane trafficking [BR:
metw04131
]
SNARE
SNARE associated proteins
Others
AAY43_02005
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AAY43_02005
Exosome [BR:
metw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AAY43_02005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ALK04694
LinkDB
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Position
447660..449924
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AA seq
754 aa
AA seq
DB search
MIEETNLRVAEAYHKDVGRGIARIDTRLMQQMGLVSGDIIEISGRAKTYAIVWPNVERDQ
GNRIRIDGNLRSNAKVGIDDRVTIRKVQAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVVSTRPAGPVVVTKDTEIAIKEKSVEEIKVSEGISYEDIGG
LKREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFEEAEKDAPSIIFIDEIDSIAPKRGEVTGELERRVVAQL
LSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRKQILLIHTRGM
PIEQDVSLGEIADVTHGFVGADLASLCKEAAMHALRRITPEIDIEEEIPQEVIDNLVVTK
EDFREALKNIEPSAMREVYIEVPHVGWDDIGGLENAKQELIEAVEWPLKYPEIFNVINVK
PPRGILLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAIRETFRKAKQA
APTVVFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIIAATNRPDMVDP
ALLRPGRFDRLIYIKPPDKASREKIFEIHTQGKPLADDVSLSELADMTDGYVGADIEGIC
REAAMLALREVVTPGVSRSDIEKRAGEIRISKRHFEHAIRRVKPTTSRETLSAYEKTAEL
FAKYATELEEEAPETGEQEKEIEQESAPGFFEAE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaaacgaacttgagagttgctgaagcttatcataaagacgtgggcagggga
attgcaagaatcgacacccgactgatgcagcagatggggcttgtaagcggggacataatt
gagatctcaggaagagccaaaacctatgcgattgtctggccaaacgtagagcgcgaccag
ggaaaccggatacgaattgacggaaatctgcgcagcaatgcaaaagttgggattgatgac
agagtaactatccggaaagtccaggcaaaacatgctcaaagagttacccttgctccctcc
cagcctgtaagacttgtcggaggtgcccattacatcctcagaattatcgagggaagacct
ctgaataaaggtcaacagataagggtggaaactgtaaataacccacttactttcgtggtg
gtatcaacaaggcctgcaggacctgttgttgttaccaaggataccgagatcgccatcaaa
gagaaatcggttgaagagattaaggtttcagaaggtatttcatacgaagatattggtggg
cttaagcgagaaattcagcttgttagggaaatgattgagctgccattaaggcatcctgaa
cttttccagaagcttggaattgagccacccaaaggagtattgcttcacgggccacctggt
acaggcaagacactgattgcaaaggcggttgcaagtgaaactgatgccaatttcattact
atcagcggtcctgagatagtttccaagtactatggagagagtgaacaaaaactccgtgag
atcttcgaggaagctgaaaaggacgcaccatctatcatcttcatagatgaaatagattcc
attgctcccaaacgtggtgaagttacgggagaactggaacgcagggtggtcgcccagctg
ctttccctcatggacgggcttaagtccagaggtgaggtagttgtaatagctgccacaaac
cgtccgaattcaatagatgaagctctccgccgtggtggaagatttgacagggaaattgaa
atcggaatcccagaccggaacggcaggaagcagatcctcttaattcacacaagaggtatg
ccaattgaacaggatgtaagccttggtgaaattgcggatgtaactcatggtttcgtaggg
gctgatttagcttccctatgtaaggaagctgcaatgcatgctctgagaagaataactccc
gaaatcgatattgaagaagagattcctcaggaagttattgataacctcgtagttaccaaa
gaagactttagggaagccctcaagaatatcgagccttcagcaatgagggaagtttacatt
gaggttccacacgtaggctgggatgatatcggaggactcgagaatgcaaagcaggaactt
attgaggctgtagagtggcctctgaagtatcccgagatctttaacgtcatcaatgtaaaa
cccccaagaggcatattgctcttcggacctccaggtacaggtaaaaccctgcttgcaaag
gctgttgccagtgaaagcgaagctaatttcatcagtatcaaaggtccggaactgcttagc
aagtacgtgggtgaatccgaacgtgcaatccgggagaccttcaggaaagcaaaacaggct
gcaccaacggttgtcttctttgatgagattgattcaattgccccccaaagaagctctgtt
tcagacactcacgtgtccgaaagagttgtcagccagattcttactgaactggatggggta
gaggaactcaaagatgtaatcattatcgcggctactaatcgtccagatatggtggatcct
gctctgctgagacctggccgctttgacaggctcatttacatcaagccacctgataaagct
agcagagaaaagatctttgagattcatacacaggggaaacctcttgcagacgatgttagc
ctttcagaactcgcggatatgactgatggatatgtaggtgcggacattgaaggcatctgc
agggaagctgcgatgctggcacttagggaggtagtcactccgggagttagcagaagcgac
atagagaagcgggcaggagaaatcaggatttcaaagagacactttgaacatgcaatccgc
cgcgtaaagccaacgacatccagagaaactctttcggcttatgaaaaaactgcggaactc
ttcgctaagtatgcaactgagcttgaagaggaagctccagaaactggggaacaggaaaaa
gaaatcgaacaggagagtgctccgggcttctttgaggctgaataa
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