KEGG   Methanosarcina sp. 795: AAY43_02840
Entry
AAY43_02840       CDS       T10855                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
metw  Methanosarcina sp. 795
Pathway
metw02024  Quorum sensing
metw03060  Protein export
metw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:metw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AAY43_02840
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AAY43_02840
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AAY43_02840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:metw02044]
    AAY43_02840
Enzymes [BR:metw01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AAY43_02840
Secretion system [BR:metw02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AAY43_02840
  Eukaryotic Sec-SRP protein
   AAY43_02840
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 6PF2K Zeta_toxin APS_kinase AAA_33 AAA_17 AAA_16 nSTAND3 KTI12 MobB MeaB Thymidylate_kin AAA_24 ParA NTPase_1 AAA_30 NACHT PFOR_II AAA_18
Other DBs
NCBI-ProteinID: ALK04827
LinkDB
Position
651970..653301
AA seq 443 aa
MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQKIKERA
LKEDPPAGMNPREHVIRIVYQELMGIIGKGAEIQLKPQTIMMVGLQGSGKTTSAAKLARY
FQRKGLKAGVIAADTFRPGAYHQLKTLCEKLNVAFYGEENNPDAVEITRNGLKDLEKYDV
KIVDTAGRHALEADLIDEMERINAVAKPDHKFMVLDAGIGQQASQQAHAFNNSVGITGVI
ITKLDGTAKGGGALSAVAETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDLKTLIEK
AEETLTEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGLGGIKLSDE
MFQATSDKMKSYKVIMDSMTEEEMNDPKLIGGSRIKRISRGSGRSPEEVRELLKYHKMMQ
TALKGFRGGKFNIQKMMKKKLGM
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggtaatggaaaaacttggagactccttacagggggcgcttaaaaagctgatcggcgca
gggcgaattgatgagcgcacggtcaatgaagtagtaaaagatatccagcgagctctgctc
caggctgatgtcaatgtaaaacttgttatgggaatgtcccagaaaatcaaagagcgcgca
ttaaaagaagaccctcctgcaggtatgaacccgagggagcacgtaatccgcatagtatac
caagagttaatgggaattatcggcaagggagctgaaatccagctcaagccgcagactata
atgatggttggacttcagggaagtggaaaaactaccagcgctgcaaagcttgcccgctac
ttccagaggaaaggacttaaagcaggagttatcgccgcagacactttccgtcctggtgca
taccatcagcttaaaaccctatgtgaaaaacttaacgtagctttctatggagaagaaaac
aatcccgatgccgttgaaatcacaagaaacggactcaaagacctggaaaaatatgacgta
aaaatcgtggatactgctgggcgccatgcccttgaagctgacctcatagatgagatggaa
cggatcaatgctgttgcgaaaccagatcacaagttcatggtgctggacgcaggtatagga
cagcaggcaagccagcaagctcacgcctttaataattctgtcgggattacaggcgttatt
ataacaaagcttgacggaaccgcaaaaggaggcggagctctctctgctgttgccgaaaca
aaagcacctattgccttcattggtgtaggagagacaccagaagactttgagaaatttgaa
gctgacagatttatctcaaggcttctcggcatgggagacctcaaaaccctgatagaaaag
gctgaagaaaccctgaccgaagaggatgtgaatgtggaagctctgatgcagggacgcttc
actctcaaagacatgtacaagcagcttgaagccatgaataagatgggtccgctcaaacag
ataatgtccatgctccctatgggaatgggaggattaggaggtatcaagctctcagatgag
atgttccaggctacaagtgacaagatgaagagttacaaggtcatcatggattccatgaca
gaggaagaaatgaatgatccaaagctcataggcggttcccgaataaaaaggatttcaaga
ggttcaggacgcagccctgaagaagtaagagagcttcttaaataccacaaaatgatgcag
acagctctaaaaggctttagaggcgggaaattcaatattcagaagatgatgaagaaaaaa
ctcgggatgtaa

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