Methanosarcina sp. 795: AAY43_03030
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Entry
AAY43_03030 CDS
T10855
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
metw Methanosarcina sp. 795
Pathway
metw03030
DNA replication
metw03420
Nucleotide excision repair
metw03430
Mismatch repair
metw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAY43_03030
03420 Nucleotide excision repair
AAY43_03030
03430 Mismatch repair
AAY43_03030
03440 Homologous recombination
AAY43_03030
03460 Fanconi anemia pathway
AAY43_03030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metw03000
]
AAY43_03030
03032 DNA replication proteins [BR:
metw03032
]
AAY43_03030
03400 DNA repair and recombination proteins [BR:
metw03400
]
AAY43_03030
Transcription factors [BR:
metw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AAY43_03030
DNA replication proteins [BR:
metw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AAY43_03030
DNA repair and recombination proteins [BR:
metw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AAY43_03030
MMR (mismatch excision repair)
AAY43_03030
DSBR (double strand breaks repair)
HR (homologous recombination)
AAY43_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Ssb-like_OB
REPA_OB_2
OB_MEIOB_N
TriTu
POT1PC
SHLD2_OB1
RecG_wedge
BRCA-2_OB1
Motif
Other DBs
NCBI-ProteinID:
ALK04853
LinkDB
All DBs
Position
696721..698175
Genome browser
AA seq
484 aa
AA seq
DB search
MTDVESIYKKLSHVISKEDFLQRVQRKMESMGGLCDEPMAAMLVANELGFSDVSRENVKI
KDIKADSGPVNFIARVLSVFDAKEFTRNDGTIGRVGNLIVGDETGKIKLTLWDSMADLIK
VGKIKVGQTLQISGYAKQGYSGVEVNVGNNGVITESEEEIDVVASSQKIKDVKDGMGDLN
LIGKVLEVSEIRTFQRKDGSTGKVGSLLLGDATGTIRVTLWDEKTEFLNQIEYGDTVELI
NAYARENAFSQKVELQVGSRSIIRKSEKEIEYKEKFTPIADISADMNDVNVCGRVLDIGE
IRTFEKRDGSTGRVGNLLIGDSTGKIRLTLWDEKTDFLDEIDFDETIEVLHAYSRENAFN
QQVELNLGSRGIIQKSEKEIEYREKFTDIADIVPGESYSVQGKVSEIGELREFEREDGTE
SVVANLQLEDETGSIRITLWGEQAYVIEDLDIDSEIQIINAYAKYGLNEEIELSVGNRSR
VIIL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgttgaatcaatatataaaaagctcagccatgtcatcagtaaagaagatttt
ctgcagcgtgtccagagaaagatggaaagcatgggcgggctttgtgatgaacctatggct
gccatgctggttgccaatgaactaggattttcagatgtaagtcgggaaaatgtaaagatt
aaggacattaaagctgacagcggaccggttaactttattgcaagagtattatcggttttt
gatgccaaggaatttacccggaatgatgggacgataggaagggtgggaaatttaattgtc
ggagatgagaccggaaaaataaagcttactctctgggacagtatggcagatctcatcaag
gttggaaaaatcaaagtagggcaaaccctccagatcagcggctatgcaaagcaaggatac
tccggagtggaagtcaatgtaggaaataatggagtcataaccgagagtgaagaagaaatc
gatgtggttgcaagcagccagaagattaaggatgtaaaggatggcatgggagacctgaat
ttgataggtaaagttctggaagtctcagaaataaggactttccagagaaaagacggcagc
actggaaaggttggaagtctgctccttggggatgcaacaggcacaatcagagtgacatta
tgggatgagaaaaccgagtttctgaaccagatagaatatggagatactgtggagcttatc
aatgcttacgcccgggaaaatgcatttagtcagaaagttgagcttcaggtaggaagccga
agtataatccggaaaagtgaaaaggaaattgagtataaggagaaatttaccccgattgca
gatatcagtgctgatatgaatgatgtcaatgtttgtgggagggtactggacattggggaa
attcgcacctttgagaaaagagatgggtccaccggaagagtcggaaatctccttattggg
gattccacaggaaaaatcaggctgactctctgggatgaaaaaaccgactttctggatgag
attgattttgacgagacaatagaagtactccatgcctattctcgggaaaatgctttcaac
cagcaggtggagctgaatcttggaagcagagggataatccagaaaagtgagaaggaaatt
gagtatagagaaaagtttacggatatcgctgatattgtcccaggggagagttactcagtc
caggggaaagtttccgaaattggagaactccgggagtttgagagggaagatggaaccgaa
agtgtggttgcaaatctgcaacttgaagacgaaaccggtagcataaggataactctctgg
ggagagcaggcatatgttatcgaggatcttgatattgattccgagatacagattattaac
gcatatgcaaaatatggtctgaacgaggaaatcgagttgagtgtcgggaaccggagcaga
gtgattatactttga
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