Methanosarcina sp. 795: AAY43_03245
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Entry
AAY43_03245 CDS
T10855
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
metw Methanosarcina sp. 795
Pathway
metw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
metw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AAY43_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metw03019
]
AAY43_03245
03012 Translation factors [BR:
metw03012
]
AAY43_03245
Messenger RNA biogenesis [BR:
metw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AAY43_03245
Translation factors [BR:
metw03012
]
Eukaryotic type
Release factors
AAY43_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_Ribbon_1
Vps36-NZF-N
Zn_ribbon_LysW
Zn_ribbon_DUF2089
Cas12f1-like_TNB
Zn_ribbon_3
DUF7575
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ALK04889
LinkDB
All DBs
Position
750574..751821
Genome browser
AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLESLRNKKGRSTELISLYIPPDKQIFDVTNQLKEEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIVPPEPITVYKY
HCDSSFYLEPLEEMLKDKGTFGLLVLDRREATIGLLVGKRIQALRNLTSTVPGKQRKGGQ
SSHRFQQLRLIAIHDFYKRIGDAASEIFLAVDPKDLKGILIGGPSPTKEEFYAGEFLHHE
LMKKILGLFDTAYTDESGLSELVNAAGDKLQDLELVGQKNAVRAFFKELIADSGKVAYGE
TQVRANLEINAVDVLLLSEDLRAERVTTTCSVCGYENKWTRRWKPGEPAPAAGTCPNCGA
SLEVTDVTDVVDELSALADKSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatcggcacatgagaaatatgaatttaaaaagaagcttgaaagcctgagg
aataagaagggaagaagtacagagttaatttcgctttatatacctcctgacaagcagatt
tttgacgttacaaaccagttgaaagaggaacacgggcaggctgcaaacatcaaatccaaa
ctcaccagaacgaacgtacagggagctattgaatctcttctctcaaggctcagatacctg
gacaaggtgcctgaaaacggaatagtgtatttcacaggagctgtggatataggagccaac
aaaacgagcatggaaagtgaagtaatcgtccctccggagcccatcactgtttataaatat
cactgtgactcaagtttctatcttgagcccctggaagagatgctcaaagataagggcact
ttcgggcttttggtacttgaccgcagggaagctacaatagggcttctggtaggaaaacga
atccaggctttacgcaacctgacttctacagttccgggcaagcaaaggaaaggtggtcag
agttctcaccgtttccagcagctcaggctcattgctatccacgatttctacaagaggata
ggagatgctgcgagtgagattttccttgcggttgaccctaaagatctgaaaggtatcctg
ataggagggccttcccctacgaaagaagagttctacgccggagagttcctgcaccatgaa
cttatgaagaagatacttggactctttgatacggcttatacggatgaatccgggctttcg
gaactggtcaatgctgccggagataaacttcaggatcttgagctcgttggacagaagaat
gctgtcagagcttttttcaaagagcttattgccgattcaggcaaagtagcttatggggaa
actcaggttcgggcaaaccttgagattaatgctgtggatgtgcttctgctttccgaggat
ttgcgggctgaaagggtaaccaccacctgcagtgtttgcggatatgaaaataagtggaca
cggcgctggaagcccggggaacccgctcctgcagcaggaacctgtccgaattgtggagct
tcacttgaagtcacagacgttactgatgttgtggatgaactctcagcacttgctgacaaa
agcaatgcaaaagttgtttttgtatctacggactttgacgaaggctcgcagcttatgaac
gctttcggcggcattgctgcaatcctcaggtacagcactggggtataa
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