Methanosarcina sp. 795: AAY43_03350
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Entry
AAY43_03350 CDS
T10855
Name
(GenBank) DNA repair protein RadB
KO
K04484
DNA repair protein RadB
Organism
metw Methanosarcina sp. 795
Brite
KEGG Orthology (KO) [BR:
metw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metw03400
]
AAY43_03350
DNA repair and recombination proteins [BR:
metw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AAY43_03350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
AAA_25
RecA_N
Zot
nSTAND3
TrwB_AAD_bind
IstB_IS21
AAA_24
nSTAND_NTPase5
PhoH
SRP54
CbiA
ATPase_2
IPT
AAA_30
AAA_22
AAA
AAA_31
SLFN-g3_helicase
CLP1_P
DUF815
DUF87
MipZ
AAA_18
AAA_19
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ALK06569
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All DBs
Position
773589..774302
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AA seq
237 aa
AA seq
DB search
MVRLYLIKQKKRCHFIEKLLSSGCKPLDELLGGGFEKGIVTQIFGPAGTGKTNICIQLSV
ECVKQGQRVIYIDTEGLSPSRFRQIAGENAKEIAKSIIIYEPMNFEEQYAAVREVERIAG
ENIGLVILDSATSFYRFELEDDETSMKSRRELANQIGFLHALARKYGFAVVITNQVYSDI
ASGGVRPLGGSSLEHISKTIIRLEKTGEGTRRAILYKHRSRPEGSSAEFTITAEGIR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggttcggttatatctcatcaagcagaaaaagaggtgtcacttcatagagaaattatta
tcttccggctgcaagccccttgatgaacttcttggaggaggttttgagaaaggcattgta
actcaaatcttcggacctgcaggaactgggaaaacaaatatctgtatccagctttcggta
gaatgcgtaaaacaagggcaaagagtcatttacatagatactgaaggactttctccttca
cgtttcaggcagattgcaggggaaaatgcaaaagaaatagcaaagagcatcatcatctat
gagcccatgaattttgaagagcagtatgcagccgtaagagaggtggaaagaatagctgga
gagaatatcggtctcgtgatcttggattctgcaacctcattctacaggttcgagcttgaa
gacgatgaaacaagcatgaaaagccgcagagaacttgccaaccagataggatttttacat
gccctagcccgcaaatatggttttgccgtagtcataaccaaccaggtatattcagatatt
gcctcaggaggggtgcgcccccttggtggcagttccctggagcatatctcaaagacgatt
atcagactggaaaaaacaggcgaaggaaccaggcgcgccatcctgtacaaacatcgttct
cgtcctgaaggctcaagtgctgaatttacaattacagctgaaggaattcgctaa
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