KEGG   Methanosarcina sp. 795: AAY43_03510
Entry
AAY43_03510       CDS       T10855                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
metw  Methanosarcina sp. 795
Pathway
metw03030  DNA replication
metw03410  Base excision repair
metw03420  Nucleotide excision repair
metw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:metw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AAY43_03510
   03410 Base excision repair
    AAY43_03510
   03420 Nucleotide excision repair
    AAY43_03510
   03430 Mismatch repair
    AAY43_03510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metw03032]
    AAY43_03510
   03400 DNA repair and recombination proteins [BR:metw03400]
    AAY43_03510
DNA replication proteins [BR:metw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AAY43_03510
DNA repair and recombination proteins [BR:metw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AAY43_03510
   MMR (mismatch excision repair)
    Other MMR factors
     AAY43_03510
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    AAY43_03510
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: ALK04933
LinkDB
Position
complement(815408..816145)
AA seq 245 aa
MFKAAINAELLKDAIAALAVIVDEVRIKIKPEGISVKAVDPANVAMGIFELGSSAFDEYS
ADESEIGIDLNKIMDLLGIAEKNDTVRMELEEGNQKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLDLPAKVVLNGADLRRAVKAAEKISDHLLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLADIVKPTNKVNEVSLSLGKDFPILIDFEIANGAGRISYLLAP
RIESE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgccgcattggctgta
attgtagatgaggtcagaattaaaataaagccggaaggtatttcggtaaaagctgttgat
cctgccaatgtcgcaatgggaatttttgagcttggatcatccgctttcgatgaatatagc
gctgatgagtctgaaataggaatagacctgaacaagattatggacctgctgggaattgcg
gagaagaacgacacagtccggatggaacttgaagaagggaatcaaaaactcctgattgat
gtcggagggctgtcttatacactttctcttctcgatccttctacaattcgggcagaacca
agagttccccagctagatttgcctgcaaaagttgtcctgaatggagctgacctcaggcgt
gctgtgaaagctgcagagaaaataagtgatcatctactaatgggggtttctgatgatacc
ttctatatggaagcaaaaggcgatactgaccaggttcgcctggagatgggtagggaccag
ctgatcgacctgaaggcaggtgaagcctgttctcttttctctctggactatctggccgac
atagtcaaacctacgaataaagtcaatgaggtaagtctttcccttggaaaagatttcccg
atactcatagatttcgagattgcaaacggtgcaggcagaatttcttatctcctggctccg
agaattgagtcggaataa

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