Methanosarcina sp. 795: AAY43_07335
Help
Entry
AAY43_07335 CDS
T10855
Name
(GenBank) phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metw Methanosarcina sp. 795
Pathway
metw03410
Base excision repair
metw03430
Mismatch repair
metw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAY43_07335
03430 Mismatch repair
AAY43_07335
03440 Homologous recombination
AAY43_07335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metw03400
]
AAY43_07335
DNA repair and recombination proteins [BR:
metw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAY43_07335
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAY43_07335
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAY43_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHHA1
DHH
EIIA-man
FRP
Motif
Other DBs
NCBI-ProteinID:
ALK05549
LinkDB
All DBs
Position
1693223..1694560
Genome browser
AA seq
445 aa
AA seq
DB search
MSELEKLINLAKNAAEKIRKYRFARVVSHNDADGLTSAGIMAQALLRAGICFQISIVGRL
DEAVIEEVNRSISVEEVVIFCDMGSGQPELIGKVAADVIVLDHHQPVGQSPAKAIVNAHL
AGIDGATDISASGTCYLVARELSADNIDLAGLALAGAVGDKQLFRTANAFILGEALKAGV
VSIRKGLKVGDGDLVDVLAYTIEPFMDITGYPEKTKEFLDLLELSGRIEDLSEEEVSRLA
NAVALKLVRQASPEAIEAVIGEVLLLNRELVRNVYDFNSILSTCGKQKIYGLAISLCLKD
REIVNEALSLKKEYEKKLVLNIRENVEKIRKGENIWYVITADAISTGSLASTVVRYLHPE
LPFICVNESEGILKVSARGTRELVSKGLDLAFALREAASAVGGSGGGHNVASGAVLPIGS
EEEFLSIADRIIGEQLRKPGKGKAR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagcttgagaaactgataaatcttgcaaaaaatgcagccgaaaaaatccggaaa
tacagatttgcacgtgtagtctcacacaatgatgcggatgggctgacctcagccgggata
atggcacaggcactgctgcgggcaggcatttgtttccagatttctatagttggaaggctg
gatgaagctgtgattgaggaagtgaaccgaagtatctccgtggaagaagttgttattttc
tgtgatatgggcagcgggcagcctgaacttataggcaaggtggcggctgacgttatagtg
cttgaccatcaccagcctgtagggcagtcgccggcaaaggcaatcgtaaacgcccatctt
gcaggaattgatggagccactgacatctcggcttccggaacctgctatcttgtagccaga
gaactgtcagccgataacattgatcttgcagggcttgcgcttgcaggcgcagtcggtgac
aagcagcttttccgcacagctaatgccttcattctgggagaggctctaaaagcaggggtc
gtgtccatcaggaaggggctcaaagtaggagacggagaccttgtagacgtgcttgcatat
actattgagcctttcatggatataaccggctaccctgagaaaactaaagaatttctggac
ctgctggagctttcaggaaggattgaagatctttctgaggaggaagtctcaaggcttgcc
aatgctgtcgccctcaaacttgtaaggcaggcaagcccggaagctatcgaagctgtcata
ggagaagttttactcctgaaccgggagcttgtaagaaatgtttacgattttaactctatt
cttagcacatgcggaaagcaaaaaatctatggactggctatttcactctgcctgaaagac
cgggaaattgtcaatgaagctctctctcttaaaaaagaatacgagaagaaacttgtactg
aatatcagggaaaatgttgaaaaaattcgcaaaggagaaaacatctggtatgttattacc
gctgatgccatttctacaggcagccttgcaagtacagttgtccgttaccttcatcccgaa
ctccctttcatctgcgtaaacgaatctgaaggtatcctgaaagtctccgcaagaggcacc
cgtgaactcgtctcaaagggtcttgaccttgcttttgccctgagagaggcagcaagcgca
gttggaggaagcggaggtgggcataatgtagcttctggagctgtactccctatagggagt
gaagaggaattcctgagcattgcagatcggataataggtgagcagctccgaaagcctgga
aaaggaaaagcaagataa
DBGET
integrated database retrieval system