Methanosarcina sp. 795: AAY43_08380
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Entry
AAY43_08380 CDS
T10855
Name
(GenBank) CdcH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
metw Methanosarcina sp. 795
Pathway
metw04141
Protein processing in endoplasmic reticulum
Brite
Messenger RNA biogenesis [BR:
metw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AAY43_08380
Ribosome biogenesis [BR:
metw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AAY43_08380
Membrane trafficking [BR:
metw04131
]
SNARE
SNARE associated proteins
Others
AAY43_08380
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AAY43_08380
Exosome [BR:
metw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AAY43_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ALK05711
LinkDB
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Position
1929386..1931710
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AA seq
774 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTTLLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWD
QGLVRIDNFIRQNAGVSIGEKVTIRKVEAPEAKKLVLALPESMTQGGPELQFGEHANEII
KRHILKRPVFRGDIIPIINSMSQPMTESLTTSQVIPLVAVETEPSNTIVLITEATLIELR
KKPVQGYEKATRGVTTYEDIGGLGEEIMRVREMIELPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMVERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEGYEETEEAGEAEIGAGEASERERKEKVDKFLMYLA
ERTQGFVGADLLALVQEAAMRCLRENLPDLDLEKDAIPPERLEKIVVTRKHFEDALMEAE
PSALREIYVEMPTVTWDDVGGLEEAKQAIIEAVEWPIKNPEKFARMGIKAPKGILLYGPP
GTGKTLIAQAVSRESNANFISVKGPEMFSKWLGESEKAIRETFRKARQVAPCVIFFDEID
SVAAMPGMESTDSRTSERVLNQLLTEMDGLESLRDVVVIAATNRPNLLDPAILRPGRFDR
LVYIGPPDRKGRLKIFKIHTSKTPLADDVDLETLADITEGYVGADIESVCREAVMIALRE
NFDTEYVEMRHFREALKKVKPTITENIAQFYEKIEAQFKGGQKLTEPASYIGYR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaggcatatcctatcgaccttggaagaggaatt
atacgacttgaccctacaaccttactgaaactccagctctcgccaggcgatattgttgaa
ataaggggaaagaaaaagaccacagcaaaagtatggagagctgacaggcaggactgggat
cagggactcgtgagaattgataacttcatccggcaaaatgcaggcgtctccataggggag
aaagttactattagaaaggttgaagctccggaggcaaagaaacttgttctggcacttccg
gaaagcatgacgcagggggggcctgaacttcagtttggggaacatgcaaatgaaattata
aagaggcatatcctcaaaaggccagtcttcaggggagacattattcctataataaattcg
atgtcgcagccaatgactgagtccctgacaacaagccaggtaattcctctggtcgcggtt
gagaccgaaccttcaaacacaattgttctcatcacggaggccacgcttatcgagcttcgc
aaaaagccggtacaagggtacgaaaaagcaacccggggcgtaactacctatgaggacata
ggaggtctcggggaagagattatgcgtgtccgggaaatgatagagctgcccatgaagcat
cctgagcttttcgctcacctcaatatcgagccaccgaaaggagttattctctacggtcca
ccaggaaccggaaaaactctgattgcaaaagccgtagccaatgagtctggggcaagtttc
cattacattgccggtcctgaaattgtagggaagttctacggagaaagtgaagagaggctc
aggaaaatctttgaagaggcaacccaggatgcgccatcagtcattttcattgatgaaata
gattccatcgccccgaaacgggaaaacgtgacaggggaagtggaaaggcgtgtggttgcc
cagcttcttaccctgcttgacgggatggtagagaggggacaggttgttgttataggtgct
accaaccgtgtagatgcaattgatccagcactcaggagaccaggccgctttgacagggaa
atccatataggtgtacctgatacaaaggataggtacgaaatcctgcagatccatacaaga
ggcatgccaatagagggatatgaagagactgaggaggctggtgaagctgaaattggagct
ggtgaggcttcggaaagagaaagaaaagaaaaggtagataaatttctgatgtatctggct
gaaaggactcagggcttcgtgggcgcagacctgctggctctggttcaggaagcagccatg
cggtgcctcagagaaaatctacctgacctagatctggaaaaagatgcgattccgcctgaa
agactggagaagatcgttgtaaccagaaaacactttgaagatgccctgatggaggctgaa
ccctcagctctcagagagatttatgtagaaatgcctacagttacctgggatgatgtgggt
ggactggaggaagcaaagcaagccattatcgaggcagtggagtggcctattaaaaatccg
gaaaagttcgctaggatggggataaaagctccaaaggggatcctgctttacggtccgcca
ggtaccggaaaaaccctgatagcccaggcggtttccagggagtctaatgccaacttcata
agcgtcaaaggacctgaaatgttctcaaaatggcttggtgaatcggaaaaagccattcgg
gaaaccttcagaaaagccaggcaggttgctccctgtgtgattttctttgacgagattgat
tcggttgctgcgatgccaggcatggaatccacggacagccgaacctctgaaagggtattg
aaccagctcctgaccgaaatggatgggcttgaatccctcagggatgttgtagtaattgcc
gcaactaaccgccctaacctgctggaccctgcaatcctgcgtccagggcgctttgaccgg
ctggtctatattggtccccctgatcggaaaggcaggctcaagatcttcaaaatccacaca
agtaaaacacctcttgctgacgacgtggaccttgaaacccttgccgatataaccgagggt
tacgtgggtgccgatatagaatctgtgtgcagggaagccgtaatgattgcccttagagaa
aattttgacacggaatatgtggaaatgcggcactttagagaagctctcaagaaggtgaaa
cccaccattacagagaacattgctcagttctatgagaagatcgaggcacagttcaaaggt
ggccagaaacttacggagccagctagttatatcgggtacaggtaa
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