Methylobacterium sp. XJLW: A3862_01040
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Entry
A3862_01040 CDS
T05508
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx00061
Fatty acid biosynthesis
metx00071
Fatty acid degradation
metx01100
Metabolic pathways
metx01212
Fatty acid metabolism
metx02024
Quorum sensing
metx04146
Peroxisome
Module
metx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A3862_01040
00071 Fatty acid degradation
A3862_01040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A3862_01040
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3862_01040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
metx01004
]
A3862_01040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metx04147
]
A3862_01040
Enzymes [BR:
metx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A3862_01040
Lipid biosynthesis proteins [BR:
metx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A3862_01040
Exosome [BR:
metx04147
]
Exosomal proteins
Exosomal proteins of breast milk
A3862_01040
Exosomal proteins of breast cancer cells
A3862_01040
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
AWV19205
LinkDB
All DBs
Position
complement(239183..241021)
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AA seq
612 aa
AA seq
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MSGRSETRICAKPPADASTGTIPSLLRAQATRRPTAVAYVAHDPAEGRFSAITWAEMAER
VAERAAALASEALEPGARVALWLPNGIEWVAFDHAALSLGLVVVPLFPDDAPANAVDILV
DSGARIVVVRTAAQWDSLGDRAQLRTGVQRVIALEEPRGTRPSDPRLQSLRFWLAGARGS
VLNPAGRDPDALATIVYTSGTTGRPKGVMLSHRNLLAVAQAVLDRNPGSDRDVFLSYLPL
AHIFERVVGCYLPLILGAPVVFARSVAHLQEDLLFARPTILLVVPSVLERLRHSVTERAE
RTPPTRWLLRAALARGWALFAARRDGRRLGLAQAAIGLLLRSIVGRPIRRAFGGRLRLAV
SGGAVLPEDTARFCLSLGLPLVEGYGLTEAASAVTGFRLGATRPGRVGPALPGMEIRLAA
SGEIFVRSPGVMLGYWRRPNLTGEVLRDGWLYTGDLGTLQDGDLCITGRLKQMMVLSTGE
KISPEAVEAAILRDPLFRQAMVLGEGEARLSVLAVVDAAMWTQLAQDLGLDPAAEDALDD
ARARRAALDRVAAALHDGPRAARVRAVRLLRTPWTVEDGLLTPTLKLRRAVLLDRFAGTV
AALRGEPEPPRA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgctccgagacacggatctgcgcaaagccgcccgcggacgcctcgacgggc
acgatccccagccttctgcgagcccaggcaacccgccggccgacggcggtggcctacgtg
gcgcacgatcctgccgagggacgtttttctgcgatcacatgggccgagatggccgagcgg
gtcgccgaacgggcggccgccctggccagcgaggcgctcgaaccgggcgcacgggtcgcg
ctctggctgccgaacgggatcgagtgggtggccttcgatcatgcggcgctctcgctcggc
ctcgtggtggtgccgctgtttcccgatgacgctcccgccaacgccgtcgacatcctggtg
gattccggcgcccgcatcgtcgtcgtccgcacggcggcgcaatgggacagcctcggcgat
cgcgcccagctgcgcacaggagttcagcgcgtgatcgcgctcgaggagccgcgaggaacc
cgaccttccgatccgcgcctgcagagcctgcggttctggctcgcaggggcgcgtggatcc
gtgctcaatcctgccgggcgcgaccccgatgccctcgcgacgatcgtctacacgtcgggg
accaccggtcgcccgaagggcgtgatgctctcgcaccgcaatctgctggcggtcgcgcag
gctgttctcgaccgcaatcccggttcggatcgggacgtgttcctgtcctatctgcccctc
gcccacatcttcgagcgtgtggtcgggtgctatctgccgctgatcctcggagcgcccgtc
gtgttcgcacgatcggtggcgcatctccaggaggacctcctgttcgcacgcccgaccatc
ctgctggtggtcccaagcgtgctggaacgtctgcgccacagcgtgacggaacgggcggag
cggacgccgccgacgcgctggctgctgcgcgcagccctggcccgaggctgggcgctcttc
gcggcccggcgggacggacggcggctcggccttgcccaggccgccatcggcctcctgctg
cgcagcatcgtggggcgccccatccgccgcgcgttcggcggtcgtttgcggctcgcggtc
tctggaggcgccgtgcttccggaggataccgcccggttctgcctcagcctcggtctgccc
ctggtcgagggatacggcctgaccgaggcggcctcggcggtcacgggattccggctcggc
gccacgcgcccgggccgggtcggccccgcactccccggaatggagatccgcctcgcggca
tcgggggaaatcttcgtgcgctcgccaggcgtgatgctcgggtactggcgccgtccgaac
ctcacgggcgaggtcctgcgtgacggatggctgtatacgggcgatctcggcacgctgcag
gacggcgatctgtgcatcaccggccggctgaagcagatgatggtcctgtcgaccggcgag
aagatctcgcccgaggccgtggaggccgcgatcttgcgcgatcccctgttccgtcaggcc
atggtcctgggcgagggcgaagcgcggctgtcggtcctggcggtggtcgatgcggcgatg
tggacgcagcttgcgcaggatctgggtctcgatcccgcggcggaggacgccctcgatgac
gcgcgcgcccgacgggccgcgctcgatcgggtcgccgcggcgctgcatgacggaccccgc
gctgccagggtccgggcggtgcgtctgctgcggacgccctggactgtcgaggacggcctc
ctgacccccacgctgaagctgcgccgcgccgtcctccttgaccggttcgccggaacggtg
gcggccctgcgcggcgagcccgaaccgccgcgcgcctga
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