Methylobacterium sp. XJLW: A3862_07175
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Entry
A3862_07175 CDS
T05508
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03420
Nucleotide excision repair
metx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3862_07175
03430 Mismatch repair
A3862_07175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_07175
Enzymes [BR:
metx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3862_07175
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3862_07175
MMR (mismatch excision repair)
Other MMR factors
A3862_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWV19318
LinkDB
All DBs
Position
1589962..1592343
Genome browser
AA seq
793 aa
AA seq
DB search
MQNRPQAQPAGDGAPATSITARAMGALRRDAAGYLEGLNPEQRRAVETTEGPILVLAGAG
TGKTRVLTTRIAHLIATGRARPFDILAVTFTNKAAREMKHRIGTLIGPAGEGMPWLGTFH
AIGTKILRRHAELVGLKSDFTILGTDDQLRLMKQVIADQNVDEKRWPARALSHAIDGWKN
RGLGPEQVPPGEAASFAFGKGGALYTAYQARLATLNAVDFGDLLLLCLKLWRENPDVLAN
YQDRFRYILVDEYQDTNVAQYLWLRLLAQQRKNIACVGDDDQSIYGWRGAEVDNILRFEH
DFPGAVVVRLERNYRSTGHILAAASGLIAKNESRLGKTLRTDDEPGERVTVTGAWDSEEE
ARMLAESIESLQVKQHPLSEIAVLVRISAQMREIEDRFVQLGLPYRVIGGPRFYERAEIR
DALAYLRATVNVSDDLAFERIVNTPKRGLGDATLQQLHTYGRANRLPLRIAAERLCETDE
LKPRVRSTLRALTESFARWARLVEAQPHSEVAQTILEESGYTEMWQKDRSADAAGRLENL
KEFVRSMEEFPDLAAFLEHVSLVMEASEAEGAERVSLMTLHAAKGLEFDTVFLPGWEDGL
FPNQRALDESGRAGLEEERRLAHVGLTRARKRAKLSFAVNRRIHGLWSSTIPSRFIDELP
ETAVDVVEAPAHFSAGASRFDRNPAPFGSSYGTPGWQRAQANTAPGGRSGSGGGFRSAGP
GGRSGGQSGGPRQIEGELIAKSTGAPSAFQAGQRVFHTKFGPGTVAGVDGNKLTVDFDKA
GQKMVLDSFIQAG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccgcccgcaagcgcagcccgccggggacggcgcgcccgccacgtccatcacc
gcccgcgccatgggcgccctccgccgcgacgccgccggctatctcgaggggcttaatccc
gagcagcgccgcgccgtcgagaccacggagggcccgatcctcgtgctggccggcgccggc
accggcaagacccgggtgctgaccacccgcatcgcccacctgatcgccaccgggcgggcg
cgccccttcgacatcctggcggtgaccttcaccaacaaggccgcccgggagatgaagcac
cggatcggcacgctgatcggccccgccggcgagggcatgccctggctcggcaccttccac
gccatcggcaccaagatcctgcgccgccacgccgagctggttgggctcaaatccgacttc
accatcctgggcaccgacgaccagctccggctgatgaagcaggtgatcgccgaccagaac
gtcgacgagaagcgctggccggcccgggccctgtcccacgccatcgacggctggaagaac
cgcggcctcggccccgagcaggtgcccccgggcgaggctgcctcgttcgccttcggaaag
ggcggcgcgctctacaccgcctaccaggcccggctcgcgacgctaaacgccgtcgatttc
ggcgatctcctgctgctctgccttaagctctggcgggagaaccccgacgtcctggccaat
taccaggaccggttccgctacatcctggtggacgagtaccaagacaccaacgtcgcgcag
tacctgtggctgcgcctgctggcgcaacagcgcaagaacatcgcctgcgtgggcgacgac
gaccagtcgatctacggctggcgcggcgccgaggtcgacaacatcctgcgcttcgagcac
gatttccccggcgcggtggtggtgcggctggagcgcaactaccgctccaccggccatatc
ctcgccgccgcctcggggctgatcgccaagaacgagagccgcctcggcaagaccctgcgc
accgacgacgagccgggcgagcgcgtcaccgtcacgggcgcctgggattccgaggaggag
gcgcggatgctcgccgaatcgatcgaatccctccaggtgaagcagcatcccctgtcggag
atcgccgtgctggtgcggatttccgcgcagatgcgcgagatcgaggatcggttcgtccag
ctcggcctgccctatcgggtcatcggcggcccgcgcttctacgagcgcgccgagatccgc
gacgccctggcgtatctgcgcgccaccgtgaatgtcagcgacgacctcgccttcgagcgg
atcgtgaacacgcccaagcgcggcctgggcgacgccaccctgcagcagctccacacctac
ggccgtgccaaccggctgcccctgcggatcgccgccgagcgcctgtgcgagaccgacgag
ctgaagccccgcgtccgctcgaccctgcgggcgctcaccgagagcttcgcacggtgggcg
cgactggtggaggcgcagccgcacagcgaggtcgcgcagacgatcctcgaggaatccggc
tacaccgagatgtggcagaaggaccgctcggccgacgccgccggccggctggagaacctg
aaggaattcgtccgctccatggaggaattcccggacctcgcggccttcctggagcacgtc
tccctggtgatggaggcctccgaggccgagggcgccgagcgggtctcgctgatgacgctc
cacgccgccaaggggctcgaattcgacaccgtgttcctgcccggctgggaggacggcctg
ttcccgaaccagcgggcgctggacgagagcggccgcgccggcctggaggaggagcggcgc
ctcgcccatgtgggcctgacccgggcgcgcaagcgggcgaagctgtccttcgcggtcaac
cggcgcatccacgggctctggtcgtcgaccatcccgtcgcggttcatcgacgagttgccc
gagaccgccgtcgacgtggtcgaggcccccgcccacttctcggccggcgcctcgcggttc
gaccgcaacccggcgccgttcggatcgagctacggcacgccgggctggcagcgggcgcag
gccaacaccgcgccgggtggccggtccgggtccggcggcggcttccggtcggcgggcccg
ggcggccgctccggcggccagtccggcggaccccgccagatcgagggcgagctgatcgcc
aagtcgacgggcgcgccctcggccttccaggccggccagcgggtcttccacaccaagttc
ggccccggaacggtcgcgggcgtcgatggcaacaagctcaccgttgacttcgacaaggcc
ggccagaaaatggtgctcgacagcttcatccaggccgggtga
DBGET
integrated database retrieval system
