Methylobacterium sp. XJLW: A3862_08725
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Entry
A3862_08725 CDS
T05508
Name
(GenBank) histidine kinase
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metx03000
]
A3862_08725
Transcription factors [BR:
metx03000
]
Prokaryotic type
Helix-turn-helix
Other families
A3862_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
PAS_4
PAS_8
AAA_5
AAA
HTH_8
AAA_16
PAS_7
Diguanyl_cycl_sensor
TIP49
AAA_2
bpMoxR
PAS_3
GAF
nSTAND3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AWV19347
LinkDB
All DBs
Position
complement(1923360..1925225)
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AA seq
621 aa
AA seq
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MGAFGAVFEASPDPLLVLLPEEDRIADANAAAARLLGHGRPALRRARASALFPGQLAALT
AFTQAVLAKGHWWTRTLAPRDAAGRDLRVETVAFPLPGEQMRLVVALADPDALHRRQVDG
EAEAHMRAGLSEWQRMERIFRDIERGNQLILRAAGEGIYGVNAEGVTTFVNPAAARMLGC
EAADLVGRDMHAAVHHTRADGSHYPHRDCPIYAAFRDGIVHQVDHEVFWRADGTSFPVEY
TSTPIRDRGRLLGAVIVFRDISQRREAEARLTSALAEVDSLRERLELENAYLKEEIRAER
QHQGIIGRSPAIAATLRQVDLVAGTDATVLITGESGTGKELIARAIHEASRRSARPMIRV
NCAAIPRELFESEFFGHVRGSFTGALRDRIGRFELADGGTLFLDEVGEIPLDLQGKLLRV
LQERSFERVGEARTRAVDVRVVAATNRDLRAEVRAGRFREDLYFRLNVFPIQARPLRERP
EDIPPIALHLLRVAARRLTVPEPRLSEGDVRRLCRYPWPGNVRELENVIERAVILSAGGR
LRLDLPDGEATGPTDPAAPAAAHGGRPATEAERRARDRAEIVAALSLAGGRVSGPGGAAE
LLGLRPTTLASRIKAHGIPRG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgttcggagcagtcttcgaggcgagcccggatcccctgctggtgctcctgccc
gaggaggaccggatcgccgacgccaacgcggcggcggcgcgtctgctcggtcacgggcgt
ccggcgctgcggcgggcccgggccagcgcgctgtttccgggccagctcgcggccctcacg
gcgttcacccaggccgtcctggcgaaagggcattggtggacgcggaccctggcgccccgc
gacgcggcgggccgcgacctgcgggtcgagaccgtggccttcccgcttccgggcgaacag
atgcgcctcgtcgtggcgctcgcggatccggacgccctccaccgccgtcaggtcgacggc
gaggccgaggcccatatgcgcgcgggcctctccgagtggcagcggatggagcggatcttc
cgcgacatcgagcggggcaaccagctgatcctgcgcgcggccggggaggggatctacggt
gtcaacgcggagggcgtgaccaccttcgtcaatccggccgccgcgcgcatgctcggctgc
gaggccgccgacctcgtcggccgggacatgcatgccgccgtgcaccacacccgcgccgac
ggcagccactacccccatcgcgactgcccgatctacgcggcgttccgcgacgggatcgtg
catcaggtcgatcacgaggtcttctggcgcgccgacgggacgtccttcccggtcgagtac
acctcgacgccgatccgcgaccgggggcgcctgctcggcgccgtcatcgtgttccgcgac
atcagccagcgccgggaggccgaggcccggctgacgagcgcgctcgccgaggtcgactcc
cttcgggagcgcctcgagttggagaacgcctatctcaaggaggaaatccgggccgagcgc
cagcaccagggcatcatcggccgctcccccgccatcgcggccacgctgcgccaagtcgac
ctcgtggccggaaccgacgccacggtgctgatcaccggcgaatccggcaccggcaaggaa
ctcatcgcccgggcgatccacgaggcgagccgccgcagcgcgcgcccgatgatccgggtg
aactgcgcggcgatcccccgcgagctgttcgagagcgagttcttcggccatgtcaggggt
agcttcaccggggcgctgcgcgaccggatcgggcggttcgaactcgccgatggcggcacg
ctgttcctcgacgaggtcggcgagatccccctcgacctccagggcaagctgctccgcgtc
ctgcaggagcgctccttcgagcgggtcggcgaggcccgcacccgcgcggtggacgtgcgc
gtggtcgcggccaccaatcgggacctgcgcgccgaggtccgggcgggccgcttccgggag
gatctctacttccgcctcaacgtcttcccgatccaggcgcggcccctgcgcgagcggccc
gaggacatcccgccgatcgccctgcacctgctccgggtcgccgcgcgccgcctcaccgtc
ccggagccgcggctctcggagggcgatgtccgccgcctctgccgctatccctggcccggc
aacgtccgcgagctggagaacgtgatcgagcgggcggtgatcctctccgccgggggccgg
ctccgcctcgatctgcccgacggcgaggcgaccgggcccacggacccggccgcaccggcc
gcggcgcacggcggccggccggccacggaggccgagcgccgcgcccgggatcgcgccgag
atcgtcgccgccctgtccctggcgggcggccgggtctccgggccgggcggcgcggccgag
ctgctcggcctgcgcccgacgacgctcgcctcgcggatcaaggcccacgggatcccgcgc
ggctga
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