Methylobacterium sp. XJLW: A3862_09345
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Entry
A3862_09345 CDS
T05508
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx00330
Arginine and proline metabolism
metx00480
Glutathione metabolism
metx01100
Metabolic pathways
metx01110
Biosynthesis of secondary metabolites
metx04148
Efferocytosis
Module
metx_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
A3862_09345
09106 Metabolism of other amino acids
00480 Glutathione metabolism
A3862_09345
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
A3862_09345
Enzymes [BR:
metx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
A3862_09345
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Chitin_bind_4
Motif
Other DBs
NCBI-ProteinID:
AWV15687
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All DBs
Position
2062584..2064929
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AA seq
781 aa
AA seq
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MDFHRRFTVLMCAPAFDPDDLEGARVNQIVAAVEQRGFEVVRARRVEDAAIAVQTDAAVG
CLVVDWGKRGLDGKAAALIDMMRKRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYAQTLKTPFFGALVDYAEKGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKIVL
SSLIAEDDLVLFDRNNHKAAHHGALFLGGGIPIFLETDRNAYGLIGPMYHEALDETRIRE
KIRRNPLVTDPEAWRRERPFRVAVIEQCTYDGTIYDAQEILEKIGHLCDYILFDEAWAGF
MKFHPLYARRFAMGLTGLDETSPGIVATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPLFASLDVGAQMMKGRSGMILWDDTIRLGIEWRKKVRAIRREF
EENERDPARRWFFDPFVPDVTVNADGAEVPWESVPTDELAATPRHWELKPGARWHGFTHV
APGYAITDPNKLTVLTPGFDRHTGAYAQHGVPAPIVAQYLRENRIVAEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVNRRPNRYRGVRLRDLCAEFHAFHR
EAGTSTLQRRQFAPEHLPEMVMPPKKAAQLLTRNKVDYVPIAEAEGRIATTLMLVYPPGI
GTVLPGERLDDRAKPMLDYFKMFEASANLFPGFEAEIQGVYREVDPDGRIRFHTYVAREG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggacttccaccgtcgcttcacggtcctgatgtgcgcccccgccttcgatccggacgat
ctcgaaggggcgcgcgtcaatcagatcgtggcagccgtggagcagcgcggcttcgaggtg
gtgcgcgcccggcgggtcgaggacgcggccatcgcggtgcagaccgacgccgcggtgggc
tgcctcgtggtcgattggggcaagcgcggcctcgacggcaaggccgccgccctcatcgac
atgatgcgcaagcgcggcctggagatgccgatcgtcattatggtccgccgcaagcggctg
gaggacatcccggtcgaactgctcgatttcatcgacggctacatcttcctggcggaggag
acgccggaattcatcgcccgcggcctcgtcagccgggtcacgcaatacgcccagaccctc
aagacgccgttcttcggcgcgctcgtcgactacgccgagaagggcaaccagctctggacc
tgcccgggccacaacggcggcatcttctacaaccggtcgccgatcggccggatcttcgtg
gagcacctgggggaagcgatcttccgcgacgacctcgacaactcggtcctcgacctcggc
gacctgctgacccacgagggcccggcgctgaaggcccagaaggaggccgcgaagatcttc
ggggccgagaagacctacttcgtcctcaacggcacctcggcctccaacaagatcgtcctg
tcctcgctgatcgcggaggacgacctcgtcctgttcgaccgcaacaaccacaaggcggcg
catcacggcgccctgttcctgggcggcggcatcccgatctttctggaaacggaccggaac
gcctacggcctgatcggccccatgtatcatgaggccctcgacgagacccggatccgggag
aagatccgccggaacccgctggtgaccgatcccgaggcgtggcgccgggagcggccgttc
cgcgtcgcggtgatcgagcagtgcacctacgacggcacgatctacgacgcccaggagatc
ctggagaagatcggccacctctgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctacgcccgccgcttcgccatggggctgaccggcctcgacgag
acctcgcccggcatcgtcgccacgcaatcgacccacaagcagctcgcgagcttctcccag
gcctcgcagatccacacccgcgacgggcatatccgcggccagacccggcgggtcgagcac
aagcggctcaacgagagcttcctcgtccacgcctccacgtcgcccttctacccgctcttc
gcctccctcgacgtcggcgcccagatgatgaagggccgctccggcatgatcctgtgggac
gacacgatccggctcgggatcgagtggcgcaagaaggtccgggcgatccggcgggaattc
gaggagaacgagcgcgatcccgcaaggcgctggttcttcgaccccttcgtgccggacgtg
acggtgaatgccgacggcgccgaggtgccgtgggagagcgtgccgaccgacgagctcgcc
gccacgccgcgccactgggagctgaagccgggcgcccgctggcacggcttcacccacgtg
gcgccgggctacgcgatcaccgacccgaacaagctcaccgtgctcacccccggcttcgac
cggcacacgggggcctacgcccagcacggcgtgccggcgccgatcgtggcccagtacctg
cgtgagaaccggatcgtcgccgagaagaacgacctgaactcgctgctcttcctgctgacc
ccgggggtcgaatcctccaaggccggcacgctgatctcgggcctcgtcgccttcaagcgg
ctccacgacgacaacgtcccgctggaggaggccatgccggaattcgtcaaccgccggccg
aaccgctaccgcggtgtgcgcctgcgcgacctctgcgccgaattccacgccttccaccgg
gaggccggcacctccacgctccagcggcgccagttcgccccggagcacctgcccgagatg
gtgatgccgcccaagaaggccgcccagctgctgacccgcaacaaggtcgattacgtgccg
atcgccgaggccgaggggcggatcgccaccacgctgatgctggtctatcccccgggcatc
ggcacggtgctgccgggcgagcgcctggacgaccgggccaagcccatgctcgactatttc
aagatgttcgaggcctccgccaacctgttcccgggcttcgaggccgagatccagggcgtc
taccgcgaggtcgatccggacgggcggatccgcttccacacctacgtggcacgcgagggg
gcctga
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