Methylobacterium sp. XJLW: A3862_12860
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Entry
A3862_12860 CDS
T05508
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metx03016
]
A3862_12860
Enzymes [BR:
metx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A3862_12860
Transfer RNA biogenesis [BR:
metx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3862_12860
Prokaryotic type
A3862_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AWV16288
LinkDB
All DBs
Position
2822346..2823362
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AA seq
338 aa
AA seq
DB search
MEDLPPAEHQAPVPGAERRGPEGRRPQRGPRPDRPKRRDVSGWVILDKHVGMTSTHAVAV
VKRAFNAKKAGHAGTLDPLASGILPIALGEATKTVPFVMDGRKAYRFTVQWGIETDTDDA
EGRPVATSETRPDRAAVEAALPAFVGAIEQVPPRYSAIKIQGERAYDLAREGEVVELVAR
PVQIDRLAVVEHDGERTVIEAECGKGTYVRALARDLGRMLGCYGHVAALRRTRVGPFSEA
EACPVSALTDGSPEAALAYLRPVETALDAIPEVAVSRDLGLRLMRGQPVILRGRDAPVEG
KAFATCAGILVAVGDVERGELIPHRVFHLGGTAPGRSA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcttccgccggccgagcaccaggctcccgtgccgggcgctgagcgtcgtggc
ccggagggccgccgtccgcagcgcgggccgcgtcccgaccgcccgaagcgccgggacgtc
tcgggctgggtgatcctcgacaagcatgtcggcatgacctcgacccatgcggtcgcggtg
gtgaagcgcgccttcaacgccaagaaggcgggccatgccggcaccctcgatccgctggcc
tccggcatcctgccgatcgccctcggcgaggcgaccaagaccgtcccgttcgtgatggac
ggccggaaggcctatcggttcaccgtgcagtggggcatcgagaccgataccgacgatgcc
gaggggcgtcccgtggccaccagcgagacccgcccggaccgtgcggcggtcgaggccgcg
ctcccggccttcgtgggcgccatcgagcaggtgccgccgcgctactcggcgatcaagatc
cagggcgagcgcgcctacgacctcgcccgcgagggcgaggtggtggaactcgtggcccgg
ccggtgcagatcgaccggctcgcggtggtcgagcatgacggcgagcgcaccgtgatcgag
gcggagtgcggcaagggcacctacgtgcgggcgctggcccgcgacctcggccggatgctc
ggctgctacggccacgtggcggccctgcgccggacccgtgtcggtcccttctccgaggcc
gaggcctgcccggtctcggccctgaccgacggcagcccggaggcggcgctcgcctatctg
cgtccggtggagacggccctcgacgccatcccggaagtcgcggtctcccgtgatctgggc
ctgcgcctgatgcggggccagccggtgatcctgcggggccgggacgcccccgtcgagggc
aaggccttcgcaacctgtgctggcatcctggtcgccgtcggcgatgtggagcgcggcgaa
ctgatcccgcaccgggtgttccacctcggcggcacggctcctggccgcagcgcctga
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