Methylobacterium sp. XJLW: A3862_12910
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Entry
A3862_12910 CDS
T05508
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3862_12910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_12910
Enzymes [BR:
metx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A3862_12910
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3862_12910
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3862_12910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Pentapeptide
Motif
Other DBs
NCBI-ProteinID:
AWV16296
LinkDB
All DBs
Position
complement(2833722..2834612)
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLAPALVGARFSRVTLRRANLRFPFPDRFAARLEGRTVTDLARRAKYL
TAALDSGETLVMHLGMSGRFDVALPDGSNLSPGDFYLEGAQGTPKHDHVVMAMSTGATVT
YNDARRFGFMDLVPSADLAGCRHFARMGIEPLDGLTGAVIAQLFRHKIAPLKAALLDQRL
IAGLGNIYVCEALHRARLHPEAPAGSLVRPDGRPTPKANALAKAIVKVLQEAVEAGGSTL
RDYAHTDGSAGAFQHAFRVYDRVGLSCSRPGCGGSITRIVQANRSTFFCATCQPPN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcccgaagtcgagacggtgcggcggggcctggcgcccgccctggtcgga
gcccgcttcagccgtgtcaccctgcgccgggccaacctgcgcttccccttcccggatcgc
ttcgccgcccggctggaagggcggaccgtcacggacctcgcgcgccgggcgaaatacctc
accgccgcgctcgactcgggcgagaccctggtcatgcatctcggcatgagtggccggttc
gacgtggccctgccggacggcagcaacctgtcgccgggggatttctacctcgaaggggcc
cagggcacgcccaagcacgaccatgtggtcatggcgatgagcaccggcgccacggtgacc
tacaacgacgcccgccgcttcggcttcatggatctggtcccgagcgcggatctcgccggc
tgccgccacttcgccaggatgggcatcgagcccctcgatggtctgacgggggcggtgatc
gcgcagctcttccgccacaagatcgcgccgctgaaggccgccctgctcgaccagcgcctg
atcgcgggcctcggcaacatctacgtgtgcgaggcgctgcaccgggcgcgcctgcacccc
gaggccccggccgggagcctcgtccggcccgacgggcgcccgacgcccaaggccaacgcc
ctcgccaaggcgatcgtgaaggtcctgcaggaggccgtggaggccggcggctcgaccctg
cgcgactacgcccacacggatggcagcgcgggggcgttccagcacgccttccgggtttac
gatcgggtcggattgtcctgcagccggccgggatgcggcggttccatcacccgcatcgtc
caggcgaaccgctcgaccttcttctgcgcgacctgccagcccccgaactga
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