Methylobacterium sp. XJLW: A3862_16155
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Entry
A3862_16155 CDS
T05508
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03030
DNA replication
metx03430
Mismatch repair
metx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3862_16155
03430 Mismatch repair
A3862_16155
03440 Homologous recombination
A3862_16155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metx03032
]
A3862_16155
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_16155
Enzymes [BR:
metx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3862_16155
DNA replication proteins [BR:
metx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3862_16155
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3862_16155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RCF1-5-like_lid
AAA_30
RuvB_N
AAA_16
AAA_assoc_2
AAA_18
AAA_14
AAA_5
TsaE
SRP54
AAA_19
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWV16846
LinkDB
All DBs
Position
complement(3546145..3548010)
Genome browser
AA seq
621 aa
AA seq
DB search
MDATTGTPDDEPGLPGFPAPAVAATPYRVLARKYRPTNFGDLIGQDAMVRTLANGFAANR
IPQAWMLTGVRGVGKTTTARILARGLNYARAGQPDTGPTVSMPELGLHCAAIMESRHMDV
LEMDAASHTGIDDVRAIIDGIRYGPISARYKVYIVDEVHMLSEKAFNAFLKTLEEPPPHA
KFVFATTEIRKVPVTILSRCQRFDLRRVEAPTLHAHLAKVCAAEGVSVEDEALGAIVRAA
EGSVRDALSLLDQAIAHGAGTITAQSVRDMLGLADRARILDLFEAVMRGSVPAAFAELRA
QYDSGADPSVVLSDLAAFTHLVTRLKVVPETAADPTLSETERVRGAEFAEKLSIRALSRA
WQILLKAIPEVQAAPRPLAAAEMAIVRLAYAADLPTPDEALRQLKAEAAAAPAHEPPPVP
ARPPLPPIPDLHGGGSAALAAAPRTATAVPAPMTAPTAMSVPSPRPVPAAPPAPRLGRFE
DLIALADANRDILLRTALERDVHLVRFEEGRIEFRLAPGGRPSLATDIAAAIDRWTGRRW
SVALSKEEGAPTLDAAARAATETRRENAAADPFVREVLTRFPGAEIVDVRETAPEALPSA
EPDVLADGDAAPVGEAEDDDA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggacgctacgaccggcacgcctgacgacgagccgggcctgcccgggtttccagcgccc
gccgtcgcggcgacgccctaccgggtgctcgcgcgcaagtaccgccccaccaatttcggc
gacctgatcggccaggatgccatggtgcgcaccctcgccaacgggttcgcggccaaccgc
atcccgcaggcctggatgctcactggcgtccgcggcgtcggcaagaccaccacggcccgc
atcttggcccgcggcctcaactatgcccgcgccggccagcccgacaccggcccgaccgtg
tcgatgccggaactcggcctccactgcgcggcgatcatggaatcccggcacatggacgtg
ctggagatggatgccgcctcgcataccggcatcgacgacgtccgggcgatcatcgatggc
attcgctacgggccgatctcggcgcgctacaaggtctacatcgtcgacgaggtccacatg
ctctccgagaaggcgttcaacgccttcctgaagacgctggaggagccgccgccccacgcc
aagttcgtgttcgcgaccacggagatccgcaaggtcccggtgacgatcctgtcccgctgc
cagcggttcgacctccgccgggtcgaggcgccgaccctgcatgcgcatctcgcgaaggtc
tgcgcggccgagggcgtctccgtcgaggacgaggctctcggcgccatcgtccgcgccgcg
gaaggctccgtgcgcgacgcgctctcgctcctcgaccaggcgatcgcccacggcgccggc
acgatcaccgcgcagagcgtgcgcgacatgctgggcctcgccgatcgcgcccggatcctc
gacctgtttgaggcggtgatgcgcggctcggtcccggccgcctttgcggaattgcgggcg
cagtacgattccggcgcggacccgtcggtggtcctctccgatctcgcggcgttcacgcat
ctggtcacccggctcaaagtggttccggagacggccgccgaccccacgctcagcgagacg
gagcgcgtccgcggggcggaattcgccgagaagctctcgatccgtgccctgtcgcgggcg
tggcagatcctgctgaaggcgatccccgaggttcaggccgcaccccggcccctcgcggcg
gccgagatggcgatcgtgcgcctcgcctacgcggccgacctgcccacccccgacgaggcc
ttgcgccagctcaaggccgaggcagccgctgcgcccgcgcacgagccccctcccgtgccg
gcgcggccgccgctgccgccgatccccgacctgcatggcggcggctccgcggcgctggcc
gccgcaccccggacggcgacggcggtgccggcgcctatgacagcgccgaccgccatgagc
gtgccgtctccgagaccggtgcccgcagcccccccggcgccgcgtcttgggcgattcgaa
gacctgatcgctctggccgacgccaatcgggacatcctgctgcgcaccgcgctggagcgc
gacgtgcatctggtgcgcttcgaggaaggtcggatcgagttccgcctcgccccgggcggc
cgcccgagcctcgccaccgatatcgccgccgccatcgaccgatggaccgggcggcgctgg
tcggtggccctgtcgaaggaagagggcgcgccgaccctcgatgcagccgcccgggcggcg
actgagacgcgccgcgagaacgccgccgccgaccccttcgtgcgcgaggtgctgacacgc
tttcccggggctgagatcgtcgatgtgcgcgagaccgcgcccgaggccctgccctccgcc
gagccggacgttctcgcggacggcgatgccgcgccggtcggcgaggccgaggatgacgac
gcctga
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