Methylobacterium sp. XJLW: A3862_19840
Help
Entry
A3862_19840 CDS
T05508
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3862_19840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metx03021
]
A3862_19840
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_19840
Enzymes [BR:
metx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3862_19840
Transcription machinery [BR:
metx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A3862_19840
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A3862_19840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AWV17472
LinkDB
All DBs
Position
4338601..4339620
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLQVTTGDDPKRVATVVAEPLERGFGTTLGNALRRVLLSSLQGAAV
TSVQIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSQTDAPKRMTLRKTGPGLVTAGDIG
TVGDIQILNPDLVICTLDDGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLFSPV
TKVSYRVETTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQVFVNFEDPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRK
SLNEIKEVLAGMGLHLGMDIPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattcagaagaattggcaggaactgatcaagccgaacaagctgcaggtcacgacc
ggcgacgaccccaagcgggtcgcgaccgtcgtcgccgagccgctcgagcgcggcttcggc
acgacgctgggcaacgccctgcgccgggtgctcctgtcgtcgctccagggcgcggccgtg
acctcggtgcagatcgacggcgtgctgcacgagttctcgtcgatccccggcgtgcgcgag
gacgtgaccgacatcgtcctcaacatcaagaccatcgccatccgctcgcagacggacgcg
cccaagcgcatgaccctgcgcaagaccggcccgggcctcgtcacggccggcgacatcggc
acggtcggcgacatccagatcctgaaccccgacctcgtgatctgcacgctggacgacggc
gccgagatccggatggagttcacggtcgccaccggcaagggctacgtcccggctgagcgc
aaccgccccgaggacgccccgatcggcctgatcccggtcgactcgctgttctcgccggtc
accaaggtcagctaccgcgtcgagacgacccgcgagggccaggatctcgacaaggacaag
ctcaccatgacggtggagaccaacggcgcggtctcgccggaggatgcgctggcctatgcc
gcccgcatcatccaggaccagctgcaggtcttcgtgaacttcgaggatccgcgcaaggaa
gaggccgcgccgctcgcgccgcagctgcccttcaacccggcgctgcttaagaaggtggac
gagctggagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctcatccagaagtccgagggcgagatgctgcggaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtgctcgccggcatgggcctgcacctcggcatggacatc
cccggctggccgccggagaacatcgaggacctcgccaagcgcttcgaggagcactactga
DBGET
integrated database retrieval system
