Methylobacterium sp. XJLW: A3862_20775
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Entry
A3862_20775 CDS
T05508
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03030
DNA replication
metx03430
Mismatch repair
metx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3862_20775
03430 Mismatch repair
A3862_20775
03440 Homologous recombination
A3862_20775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metx03032
]
A3862_20775
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_20775
Enzymes [BR:
metx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3862_20775
DNA replication proteins [BR:
metx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3862_20775
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3862_20775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF1707
Motif
Other DBs
NCBI-ProteinID:
AWV17634
LinkDB
All DBs
Position
4562079..4565597
Genome browser
AA seq
1172 aa
AA seq
DB search
MPRQLKEVGFVHLHVHSSYSLLEGALKVGSLIKAAVADRQPALALTDTNNLFGALEFSEK
AAGEGVQPIAGIQLSVAFEAADPHQRQAPTHHGIVLLAQDEAGYANLLRLASRAYFDTAL
GEAPRLDAAALVGASEGLIALTGGLSGPLDAAFRAGRPELALGRLQRLKEAFGEDRLYVE
LQRHGLPEEGRVETALLDLAGRHGLGIVATNEPYFAKPDDYDAHDALLAIAEGRVVSDER
RRRLTPSHAFKTRAEMAALFRDLPDALQATVEIAMRCAVRARTRKPILPNFGAVAAGETP
PMAEALAEAADTGVQAVSADEPTELRRQAEAGLELRLKQHGTAPGFSEEDYRKRLAFELD
VIVSMKFPGYFLIVSDFIKWAKDHDIPVGPGRGSGAGSLVAWSLLITDLDPLRFGLLFER
FLNPERVSMPDFDIDFCVEGRERVIRYVQQRYGEGQVGQIITFGTLLARGVLRDVGRVLE
MPYGQVDKLTKLVPQNPANPVTLAQAIEGEPKLQQAMEEEPIVGRLIDIAKKLEGLHRHA
STHAAGVVIGDRPLEELVPLYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTMLRCC
TDLLKQRGIEIDLASLPLDDPNTYGPMGRGETVGVFQVESAGMRKALCEMQADRLEDIIA
LVALYRPGPMANIPVYCERKLGRDAGNEASWYPDPKLEPMLKETFGIIVYQEQVMEIAKV
LAGYSLGEADMLRRAMGKKIRAEMDAQRDRFLKGCTERGLTKAKANEIFDLLAKFADYGF
NKSHAAAYALLTYQTAYLKANFPVEFLAAAMTLDIDNTDKLAEFRQDAQRLKITVEPPSI
NTSGEVFEVRDGKIFYALAAIKGVGREAVRALVEARGDRPFKDLACLARRLNPRQINKRT
LESLVQAGALDCIEPDRARAFAAVEPMMKLAASAAEAESAGVTDMFGGVVADDVSLRIPP
HEIWPMADTLKREYAAIGFFISGHPLDEYGDLLDKLRVQSWTDFCRAVRAGTSSVGRVAA
SVLDRAERRTKTGNKMGIVTLSDRTAHFEAIIFSEGLGQYRDILEPGRPLVLQLQANLEG
EDVRARILTAEPLDQAVARHQKGIRIHLSDPRGVAPVQQRLSMRGESEVSLILKLDGGSR
EVEIRLPGKFQATPTLAGQLRTVPGVVQVEVS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagctcaaggaggtcggattcgtccacctccacgtccactcgtcctattcc
ctgctcgaaggggcgctgaaggtcggctccctgatcaaggccgcggtcgccgaccggcag
cccgccctggcgctgaccgacaccaacaacctgttcggggcgctcgaattctccgagaag
gcggccggcgagggcgtccagccgatcgccggcatccagctctcggtggcgttcgaggcc
gctgatccgcaccagcgccaggcgccgacgcaccatggcatcgtgctcctggcccaggac
gaggccggctacgccaacctgctgcggctggcgagccgcgcctatttcgacacggcgctc
ggcgaagcgccgcgcctggacgccgcggccctcgtcggagcctcggagggactgatcgcc
ctcaccggcggcctgtcggggcccctcgatgccgccttccgggccgggcggccggaactg
gccctcggccgcctgcagcggctcaaggaggcattcggcgaggaccggctctacgtcgag
ttgcagcgccacggcctgcccgaagagggacgggtcgagaccgcacttctcgaccttgcc
ggccgccacggcctcgggatcgtcgccaccaacgagccctacttcgccaagcccgacgat
tacgacgcccacgatgccctgctggccatcgcggagggtcgcgtcgtctccgacgagcgc
cgccgccggctgacgccgagccacgccttcaagacccgcgccgagatggccgcgctgttc
cgcgacctgccggacgcgctccaggccaccgtcgagatcgccatgcgctgcgccgtgcgg
gcgcgcacccgcaagccgatcctgccgaatttcggcgccgtggcggcgggcgagacgccc
cccatggcggaggccctggcggaggcggcggacacgggcgtccaggcggtctcggccgac
gagccgaccgagctgcgccggcaggccgaggccgggctggagctgcgcctgaagcagcac
ggcacggcgccgggcttctcggaggaggattaccgcaagcgcctcgccttcgaactcgac
gtcatcgtgtcgatgaagttcccgggctacttcctgatcgtctcggacttcatcaagtgg
gccaaggaccacgacatccccgtcggtccgggccgcggctccggcgccggctcgctggtg
gcgtggtcgctgctgatcaccgacctcgacccgctgcgcttcggcctgctgttcgagcgc
ttcctcaaccccgagcgcgtctcgatgccggatttcgacatcgacttctgcgtcgagggc
cgcgagcgggtgatccgctacgtgcagcagcgctacggcgaggggcaggtcgggcagatc
atcaccttcggcaccctgctcgcccgcggcgtgctgcgcgatgtcggccgcgtgctggag
atgccctacgggcaggtcgacaagctgaccaagctggtgccccagaacccggccaacccc
gtgacgctcgcccaggcgatcgagggcgagccgaagctccagcaggccatggaggaggag
cccatcgtcggccggctcatcgacatcgccaagaagctggagggcctgcaccggcacgcc
tcgacccacgcggccggcgtggtgatcggcgaccggccgctggaggagctggtcccgctc
taccgcgacccgaagaccggcatgcgggtgacccagttcaacatgaagtgggtcgagcag
gccgggctggtgaagttcgacttcctgggcctcaaaaccctgaccatgctgcgctgctgc
accgatctcctgaagcagcgcggcatcgagatcgacctcgcgtcgctgccgctcgacgat
ccgaacacctacgggccgatgggccggggtgagacggtcggcgtgttccaggtggaatcg
gctggcatgcgcaaggcgctctgcgaaatgcaggccgaccggctggaggacatcatcgcg
ctggtggccctctaccgcccgggcccaatggccaacatcccggtctattgcgagcgcaag
ctcggccgcgacgccggaaacgaggcgtcctggtacccggatccgaagctggagccgatg
ctgaaggagaccttcggcatcatcgtctaccaggaacaggtgatggagatcgccaaggtc
ctggcaggctactcgctcggcgaggccgacatgctccggcgcgccatgggcaagaagatc
cgcgccgagatggacgcgcagcgcgaccggttcctgaagggctgcaccgagcgcgggctg
accaaggccaaggccaacgagatcttcgaccttctggcgaagttcgccgattacggcttc
aacaagagccacgcggcggcctacgcgctgctgacctaccagaccgcctatctcaaggcg
aacttcccggtcgagttcctggccgccgccatgaccctcgacatcgacaacaccgacaag
ctcgctgaattccgccaggacgcccagcgcctcaagatcacggtggagccgccctcgatc
aacacctccggcgaggtgttcgaggtgcgcgacggcaagatcttctacgcgctcgccgcc
atcaagggcgtcggccgggaggcggtgcgggcgctggtggaggcccgcggcgaccggccg
ttcaaggacctggcctgcctcgcccgccgcctcaacccgcggcagatcaacaagcgcacc
ctggagagcctcgtccaggccggggcgctcgactgcatcgagccggaccgggcgcgcgcc
ttcgcggcagtggagccgatgatgaagctcgccgccagcgcggcggaggcggaatcggcc
ggcgtcaccgacatgttcggcggcgtggtggcggacgacgtgtccctgcgaatcccgccc
cacgagatctggccgatggccgacacgttgaagcgggaatacgcggcgatcgggttcttc
atctccggtcatccgctggatgagtacggcgacctgctcgacaagctgcgggtgcagagc
tggaccgatttctgccgcgcggtgcgggctgggacctccagcgtcggccgggtggcggcc
tccgtgctcgaccgggcggagcggcgcaccaagaccggcaacaagatgggcatcgtcacg
ctctcggaccggaccgcgcatttcgaggcgatcatcttctccgaggggctcggccagtac
cgcgacatcctggagccgggccgcccgctggtgctgcagctccaggcgaatttggagggc
gaggatgtccgcgcccggatcctcaccgcggagcccctcgaccaggcggtggcccgccac
cagaaggggatccgcatccacctgagcgacccgcgcggcgtcgcccccgtgcagcagcgc
ctgtcgatgcgcggcgagagcgaggtgtcgctgatcctcaagctcgatggcggcagccgc
gaggtggagatccggctgcccggcaaattccaggcgacgccgacgctcgctggccagctc
cggaccgtgccgggggtggtgcaggtggaggtgagctag
DBGET
integrated database retrieval system
