Methylobacterium sp. XJLW: A3862_24925
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Entry
A3862_24925 CDS
T05508
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metx03000
]
A3862_24925
Transcription factors [BR:
metx03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A3862_24925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_IclR
HTH_Tnp_ISL3
HTH_31
DUF7317
YuA_Gp49
HTH_3
Sigma54_DBD
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AWV18362
LinkDB
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Position
complement(5523347..5524354)
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AA seq
335 aa
AA seq
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MDEFQPPGRLVTLTDVAREAGVGESTVSRVLRNHGSYSKRAGARVAEAVARLGYVPNRLA
GSLAGQGASARLVGVVIPSLANVVFPDLLRGLTSALDAEGIPCVIGVSEYDPDREEALAA
ALLSWRPAALLLTGLEHNPGTVALARAGGVRVVEMIDTDGDGIDTVVGFSNRAVGAASAR
HLVARGYRRIAYLGHDLRIDVRAGKRLAGFEEALAEAGLALQAQEIRSGPSSPASGRAGL
EALLARHPDLDAVYFSNDDMALGGYFACLAAGLAVPGRIALFGFNGLDFAAAMPQPLSTV
RTPRLEIGRRAAACLTDQSPKKIDLGFELIEGATA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattccagccgccggggcggctcgtgacgctcaccgacgtggcccgtgaggcc
ggggtcggcgagagcacggtctcgcgggtcctgcgcaaccacggctcctattccaagcgc
gccggcgcgcgggtggcggaggcagtggcccggctcggctacgtgccgaaccgcctcgcc
ggcagcctcgccggccagggcgcgagcgcgcggctcgtgggcgtcgtcatcccgtcgctc
gccaacgtggtcttccccgacctgctgcgcggcctgacatcggcgctcgatgccgagggc
atcccctgcgtgatcggggtgagcgagtacgatccggaccgggaggaggcgctggccgcc
gcgctcctgtcgtggcggccggcggcgctgctgctcaccgggctggagcacaatcccggg
acggtggccctcgccagggccgggggcgtgcgcgtcgtcgagatgatcgacacggatggc
gacgggatcgacacggtggtcggcttctccaaccgggccgtgggggcggcgagcgcccgc
cacctcgtcgcgcggggctaccgccgcatcgcctatctcggccacgacttgcgcatagac
gtgcgggcgggcaagcggctggccgggttcgaggaagccctggcggaggccgggctggcg
ctccaggcccaggagatccggtcggggccgtcctcgccggcctcggggcgggcggggctg
gaggcgctgctggcgcgccacccggatctcgatgccgtctacttctccaacgacgacatg
gcgctcggcggctacttcgcctgcctggcggcggggctcgcggtcccgggacggatcgcg
ctgttcggcttcaacgggctcgacttcgcggcggcgatgccccagcccctctcgacggtg
cgcacgccgcgcctggagatcggccggcgggccgccgcctgcctgaccgatcagagtcca
aagaaaatcgatctcgggttcgagctgatcgagggagcgaccgcatga
DBGET
integrated database retrieval system
