Methylobacterium sp. XJLW: A3862_25520
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Entry
A3862_25520 CDS
T05508
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metx03016
]
A3862_25520
Enzymes [BR:
metx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A3862_25520
Transfer RNA biogenesis [BR:
metx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A3862_25520
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AWV18465
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All DBs
Position
5649224..5649763
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AA seq
179 aa
AA seq
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MPRLFTGLAVPPAVADALKAYQGGLPGARWIEPGDFHVTLRFLGDVEVTVADDVVEALAE
MRVRPPLTVTLDGLGIFGGDRPRALYAAVVADPALTDLQAEQERLVRRAGVEPERRKFTP
HVTLARLRRDATPEATAMYLSQAPVFAPLAFAVDRVTLFSARESTGGGPYVAEADFPFA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctgttcacagggctcgccgtgccgccggcggtcgccgacgccctcaaggcc
taccagggcgggctgcccggcgcccgctggatcgagcccggcgactttcacgtcaccctg
cgtttcctcggggatgtcgaggtcaccgtcgccgacgatgtcgtggaggcgctggccgag
atgcgggtacgcccgcccctgacggtgactctcgacggcctcggcatcttcggcggcgac
aggccgcgggcgctctacgcggcggtggtggccgatccggcgctgacggatctccaggcc
gagcaggagcggctggtgcgccgcgccggggtcgagccggaacggcggaagttcaccccg
catgtcaccctggcccggctgcgccgcgacgccacgccggaggcgacggcgatgtacctg
tcgcaggcgccggtcttcgcgccgctggccttcgcggttgaccgggtgacgctgttctcg
gcgcgggaatcgaccgggggtgggccgtatgtggcggaggcggactttccgttcgcgtga
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