Methylobacterium sp. XJLW: A3862_25550
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Entry
A3862_25550 CDS
T05508
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metx03032
]
A3862_25550
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_25550
Enzymes [BR:
metx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A3862_25550
DNA replication proteins [BR:
metx03032
]
Prokaryotic type
DNA Topoisomerases
A3862_25550
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3862_25550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWV18470
LinkDB
All DBs
Position
5654619..5657303
Genome browser
AA seq
894 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGRDYEVIASFGHIRDLPAKDGSVDPEQDFHMVWELADRGAS
RVSEIAKAVKGADKLILATDPDREGEAISWHVLEALTARKALKGIPVERVTFNAITKASV
EAAMRKPREIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVVER
EMEIERFKPREYWTLIATLTTADGATFEARLVGADGKRIQRLDVGTGDEAAAFKRDLELA
TFQVASVEAKPAKRHPQPPFTTSTLQQEASRKLGMAPAQTMRVAQRLYEGVDIGGETVGI
ITYMRTDGVDMAPEAIQDARRVIGKEFGDRYVPDVPRKYSVKAKNAQEAHEAVRPTDMSR
LPKMVARHLEPEQARLYDLIWTRTMASQMESAELERTTVDVTAKVGPRQIDLRATGQVVK
FDGFLTLYQEGKDDEEDEESRRLPPMKAGDPLTRERISSTQHFTEPPPRYSEASLVKRME
ELGIGRPSTYAAVLQTLRDREYVKIEKKRLQPEDKGRLVTGFLESFFRRYVEYDFTADLE
EQLDRVSNAEIDWRAVLRDFWRDFSAAIGETKELRVTDVLEALNGLLGPHIFPDKGDGSN
PRTCTVCGTGQLSLKLGKFGAFIGCSNYPECKYTRQLSASGVEGEGDGSSAEGGQPGVRV
LGDDPATGLPVTLRDGRFGPFLQLGEASTEKGAEKPKRSSLPKGLSPSAVDLQKALALLA
LPREVARHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGGNRAIDLIVAKEQGG
GRGRPAADPGRPLGTDAASGRDLVVKAGKYGPYVTDGEVNATLPKTMSAEALTLDEGIAL
VNAKRASGGGKPAKRGAVRKTATRAASGAKPAAKKTAAKKPAAKKTAAKKTGAG
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcgtcgtcgagtcgccggccaaagccaagacgatcaataagtatctcggc
cgcgactatgaagtgatcgcctcgttcgggcacatccgcgacctgccggccaaggacggc
tccgtggatcccgagcaggatttccacatggtctgggaactggccgaccgcggggcgagc
cgggtctccgagatcgccaaggcggtcaagggcgccgacaagctgattctggccaccgac
ccggatcgcgagggcgaggcgatctcctggcacgtgctggaggccttgaccgcccgcaag
gcgctcaagggcatcccggtcgaacgcgtcaccttcaacgccatcaccaaggcctcggtc
gaggcggcgatgcgcaagccccgggagatcgaccaggccctggtcgacgcctatctggcg
cgccgggcgctggactacctcgtcggcttcaacctctccccggtcctgtggcgcaagctc
ccgggcgcccgttcggcggggcgcgtgcagtccgtggcgctgcgcctcgtcgtcgagcgc
gagatggagatcgagcggttcaagccgcgcgagtactggacgctcatcgccacgctgacg
accgccgacggcgcgaccttcgaggcccgcctcgtcggcgccgacggcaagcgcatccag
cgcctcgacgtcggcaccggcgacgaggccgccgccttcaagcgcgacctcgaactcgcg
accttccaggtggcgagcgtcgaggcgaagcccgccaagcgccacccgcagccgcccttc
accacctcgaccctgcagcaggaggcctcgcgcaagctcgggatggcgccggcccagacc
atgcgggtcgcccagcgcctctacgagggcgtcgatatcggcggcgagaccgtcggcatc
atcacctacatgcggaccgacggcgtcgacatggcgccggaggcgatccaggacgcccgc
cgggtgatcggcaaggagttcggcgaccgctacgtgccggacgtgccgcgcaagtacagc
gtcaaggccaagaacgcccaggaggcccacgaggcggtgcggcccaccgacatgagccgc
ctgcccaagatggtggcgcgccacctcgagcccgagcaggcccggctctacgatctcatc
tggacccgcaccatggcgagccagatggaatcggccgagctggagcggaccaccgtggac
gtcacggcgaaggtcggcccccgccagatcgacctgcgcgccaccggccaggtggtgaag
ttcgacggcttcctcaccctctaccaggagggcaaggacgacgaggaggacgaggagagc
cgccgcctgccgcccatgaaggccggcgacccgctcacccgcgagcggatcagctcgacc
cagcacttcaccgagccgccgccgcgctattccgaggcgagcctcgtgaagcgcatggag
gaactcggcatcggccgcccgtcgacctacgcggcggtgctccagacgctgcgcgaccgc
gaatacgtcaagatcgagaagaagcggctgcagccggaggacaaggggcggctcgtcacg
ggcttcctggagagcttcttccggcgctacgtcgagtacgatttcaccgccgacctcgag
gagcagctcgaccgcgtctccaatgccgagatcgactggcgggcggtgctgcgcgacttc
tggcgcgatttctccgcggcgatcggcgagaccaaggagctgcgcgtcaccgacgtgctg
gaggcgctgaacggcctcctcgggccgcacatcttccccgacaagggcgacggctcgaac
ccgcgcacctgcacggtctgcgggaccggacaattgtcgctgaagctcggcaagttcggc
gccttcatcggctgctcgaactatcccgagtgcaagtacacccgccagctctcggcctcg
ggcgtcgagggcgagggggacggctcctcggccgagggcggccagccgggcgtccgggtg
ctgggcgacgatcccgccaccggtctgccggtgacgctgcgcgacggccgattcgggccg
ttcctgcagctcggtgaggcctccaccgagaagggggcggagaagccgaagcgttcctcc
ctgccgaaggggctgagtccctcggcggtcgacctgcagaaggcgctggcgctgctggcg
ctgccccgcgaggtggcgcgccaccccgagaccggcgagccgatcctggccaatctcggc
cggttcgggccctacgtgcagcatgggaagacctacgccaatctcggcaaggacgacgac
gtgctggagatcggcggcaaccgcgccatcgacctgatcgtcgccaaggagcagggcggc
ggccgcggccgtccggctgccgatcccggccgcccgctcggcacggacgctgcgagcggg
cgcgacctcgtggtgaaggccggcaagtacggcccctacgtcaccgacggcgaggtgaac
gccacgctgccgaagaccatgagcgccgaggcgctgacgctcgacgaggggatcgccctg
gtcaacgccaagcgtgcctcgggcggcggcaagccggcgaaacggggcgctgtccggaag
accgcgacgcgcgcggcgagcggcgccaagccggcggccaagaagacggcagcgaagaaa
cccgccgccaagaagaccgcggccaagaagacgggcgccggctga
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