Methylobacterium sp. XJLW: A3862_26355
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Entry
A3862_26355 CDS
T05508
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3862_26355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_26355
Enzymes [BR:
metx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3862_26355
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3862_26355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AWV18616
LinkDB
All DBs
Position
5835904..5838093
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AA seq
729 aa
AA seq
DB search
MPVVAEILIPLALDTPYSYVAPAGLDLAAGDVVQVPLGPREIVGVVWGVAESPGGSNLRP
VTDRLPFPPLSDSLRSLVDWIARYTLAPKGSALAMVLRLPDEAAAGETARVAVRITDKPP
ARPTPARTKVLAAAADGGLRGKSALAKEAGVSLSVVDGLIDDGALETVAVAPEPVAPRPD
PDFPRSPLSPAQAEAVAALVAPFPWDRPPAEDPADLRPVLLEGVTGSGKTEVYFEAVAAC
IRAGRQALILMPEIALTAQFLDRFAARFGVRPAAWHSGIGGRRRERLRAAVAEGEALVVV
GARSALFLPFARLGLIVVDEEHETAYKQEDGVHYHARDMAVVRGRLESCPVVLTSATPAI
ETRVNAARGRYRHILLPERFGGRRLPDIAAIDMRLDQPERGRFLSPPLVNAVKSTLERGE
QALLFLNRRGYAPLTLCRACGHRYQCKNCSTWLVEHRFRRALVCHQCGYAERRPEACTEC
GTFDNLTACGPGVERIAEEATALFPDRRVVVLSSDFPGGAERLRQELDAVAAGECDIVIG
TQLVAKGHNFPFLTLVGVLDADIGLTSGDPRAAERTFQLLQQVTGRAGRGEKPGRALVQT
YQPDHPVIAALLSGDAERFYAEEIQAREAAGLPPFGRLAALIVSATEREVAEAHGQALAR
AAEPPEGVMVLGPAEAPLALVRGRYRFRLLVKTERNVDLQAYLRAWIARGPKVRGNVRVA
IDVDPQSFL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgccgagatcctgatcccgctggccctcgatacaccctacagctacgtg
gcgccggccgggctcgacctcgccgccggcgacgtggtgcaggtgcctctcggaccgcgc
gagatcgtcggggtcgtctggggcgtggccgagagccccggcggctcgaacctgcggcct
gtgaccgaccgcctgcccttcccgcccctgtcggactcgctgcgcagcctcgtcgactgg
atcgcccgctacacgctggcgccgaaaggctcggcgctggccatggtgttgcgcctgccc
gacgaggcggcggccggcgagaccgcccgggtcgccgtgcgcatcaccgacaagcccccg
gcccggccgaccccggcccgcaccaaggtcctcgccgcggccgccgacggcggtctgcgg
ggcaagagcgccctggccaaggaggccggggtctcgctctcggtggtcgacgggctcatc
gacgacggtgccctggagaccgtggcggtcgcgcccgagccggtcgcgccgcggcccgat
ccggacttcccgcgctcgccgctctcgcccgcccaggccgaggccgtggcggctctggtc
gcgccctttccgtgggaccggccgccggcggaggatccggccgatctcaggcccgtcctg
ctggagggggtcaccggctcgggcaagaccgaggtctatttcgaggccgtggccgcctgc
atccgggcgggccgccaagcgctgatcctgatgccggaaatcgcgctgacggcccagttc
ctggaccgcttcgcagcccggttcggggttcggccggcggcgtggcattccggaatcggc
ggcaggcgtcgcgagcgcctgcgggccgcggtggccgagggcgaggcgctggtggtggtc
ggcgcgcgctcggccctgttcctgcccttcgcgcggctggggctgatcgtggtcgatgag
gagcacgagaccgcctacaagcaggaggacggcgtccattaccatgcccgcgatatggcg
gtggtgcgcgggcgtctcgagtcctgcccggtggtgctgacctcggcgacgcccgccatc
gagacccgcgtcaacgccgcaagggggcgctaccggcacatcctgctccccgagcgcttc
ggcgggcggcgcctgcccgacatcgcggcgatcgacatgcgcctcgaccagcccgagcgc
ggccgcttcctgagcccgccgctggtcaacgcggtgaagagcaccctggagcgcggcgag
caggcgctgctgttcctcaaccgccggggctacgcgcccctgaccctctgccgggcctgc
ggccaccgctaccagtgcaagaactgctcgacctggctggtggagcaccggttccgccgg
gcgctggtctgccatcaatgcggctatgccgagcgccggccggaggcctgcaccgagtgc
ggcacattcgacaatctcaccgcctgcggccccggcgtcgaacggatcgccgaggaggcc
acggccttgtttccggaccggcgcgtcgtcgtcctgtcgagcgacttccccggcggcgcg
gagcgcctgcggcaggaactcgatgccgtggcagccggcgaatgcgatatcgtgatcggg
acgcaactcgtggcgaagggccacaatttcccgttcctgaccctggtcggcgtgctcgac
gccgatatcggcctgacctcgggcgatccgcgggccgcggaacggacgttccagctgctg
cagcaggtcaccggccgtgccggccgcggagagaagcccggccgcgccctcgtccagacc
taccagccggaccatcccgtgatcgcggccctcctgtcgggggatgccgagcgcttctac
gcggaggagatccaggcccgcgaggcggcgggccttccgccgttcgggcggctcgccgcg
ctgatcgtttcggcgaccgagcgcgaggtggcggaggcccacggccaggcgctggcccgc
gcggccgagccgccggagggcgtgatggtgctgggtcccgccgaggcgccgctggccctg
gtgcgcggccgataccgcttccgcctgctcgtgaagaccgagcgcaacgtcgatctgcag
gcctacctgcgcgcctggatcgcccggggtccgaaggtgcgcggcaacgtccgggtcgcc
atcgatgtcgacccgcagagctttttgtag
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