Methylobacterium sp. XJLW: A3862_26765
Help
Entry
A3862_26765 CDS
T05508
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metx03032
]
A3862_26765
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_26765
Enzymes [BR:
metx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A3862_26765
DNA replication proteins [BR:
metx03032
]
Prokaryotic type
DNA Topoisomerases
A3862_26765
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3862_26765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWV18689
LinkDB
All DBs
Position
5920545..5921798
Genome browser
AA seq
417 aa
AA seq
DB search
MAGVETAENGGDLRAAAAEAGLVYVDDGRPGLSRRRSGSGFRYLDAKGAPVRDKAKLARI
RALAIPPAYTDVWICPRSNGHIQATGRDAKGRKQYRYHPDFRQAREANKFSRIMAFADAL
PGIRRRVDADMKRPGLPREKVLATVVHLLETTLIRVGNDDYARTNKSYGLTTLRDPHVRI
AGSALSFRFKGKSGKIWDVSLKDRRVARIVKACQDLPGQELFQYLDPDGTQRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFESFDSEAGAKRNIRAAIESVAGRLGNTP
TICRKCYIHPQILDCYLEGDLLLQVKGAVESELSEDLSRLRPEEAAVLGLLQARLSAAGE
SVRAGARVKPAGTRMRSLKKPRDKVAAPTTASKTSGMAETAPKAKRASRVRRKAAAA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgtcgagacggcggaaaacggcggagacctccgtgcggcggcggcggaggcc
ggcctcgtctacgtcgatgatggccggccgggcctgtcgcgccgccgcagcggctccggc
ttccgctacctcgacgcgaagggcgccccggtgcgcgacaaggcgaagctcgcccgcatc
cgcgcgctggcgatccctccggcctacacggatgtctggatctgcccccgcagcaacggc
cacatccaggcgaccggccgcgatgccaagggccgcaagcagtaccgctaccacccggat
ttccggcaggcgcgagaggccaacaagttctcgcggatcatggccttcgcggacgccctg
ccgggcatccgccggcgggtcgatgccgacatgaagcggccgggcctgccccgcgagaag
gtgctggccaccgtggtccacctgctcgagaccacgctgatccgcgtcggcaacgacgat
tacgcgcggaccaacaagagctacggcctgacgaccctgcgcgatccccatgtgcggatc
gcgggttcggccctgtcgttccggttcaagggcaagagcggcaagatctgggacgtgtcg
ctgaaggaccggcgcgtcgcccggatcgtgaaggcctgccaggacctgcctggacaggag
ctgttccagtacctcgatccggacggcacgcagcgcgacgtgacctcctcggacgtgaac
gcgtatctgcgggagatcaccggcgaggacttcaccgccaaggatttccggacctgggcc
ggtacggtgctggcggcgctggcgctgcgcgagttcgaaagcttcgacagcgaggcgggg
gccaagcgcaacatccgcgcggccatcgagagcgtcgccggccgcctcggaaacaccccg
acgatctgccgcaagtgctacatccacccgcagatcctcgactgctatctggagggtgac
ctgctcctgcaggtgaagggcgcggtcgagtccgagctgagcgaggatctctcccggctg
cggccggaggaggcggcggtgctggggctgctccaggcgcggctgtccgcggccggggag
agcgtccgggccggggcgcgggtcaagccggcgggaacgcgcatgcggagcttgaagaag
ccgcgggataaggttgcggcgccgacgaccgcttccaagacgtccggcatggccgagacc
gcgccgaaggccaaacgggcttcccgggtccgcaggaaggctgcggctgcttag
DBGET
integrated database retrieval system
