Methylobacterium sp. XJLW: A3862_26880
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Entry
A3862_26880 CDS
T05508
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3862_26880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_26880
Enzymes [BR:
metx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A3862_26880
DNA repair and recombination proteins [BR:
metx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3862_26880
Prokaryotic type
A3862_26880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWV18709
LinkDB
All DBs
Position
5948316..5949005
Genome browser
AA seq
229 aa
AA seq
DB search
MTDTPVADALEAFRASGSSWLTLPFFADGQADVVAARVDGRIAAGAQVLPAPDRIFRALR
ETPLQDVKAVILGQDPYPTPGDANGLAFSFVGAGRLPASLRVILAEAGSDRAAGGDLTPW
ARQGVFLLNSALTVEAGKSGAHLRYGWAALTDEAVRAVSDRPEPAVFLLWGAQARARAAL
IDADRHGVFESGHPSPLNRARDFPGSDPFGRANRWLAAQGRRPIDWRLG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacgcctgtggccgatgccctcgaagccttccgcgcctccggctcgtcctgg
ctgacgctgccgttcttcgccgatggtcaggccgacgtcgtggcggcccgtgtcgacgga
cgaatcgccgcgggggcccaggtgctgccggcgccggaccggatcttccgcgccttgagg
gagacgccgctgcaggacgtcaaggcggtgattctcggacaggatccctacccgaccccg
ggcgacgccaacggcctcgccttctcgttcgtcggggcggggcgcctgcccgcgtcgttg
cgggtgatcctggcggaggccggatccgaccgcgccgccggcggcgacctgacgccctgg
gcacggcagggcgtcttcctgctcaacagcgccctcaccgtcgaggctggcaagtccgga
gcgcatctgcgctatggctgggccgcactcaccgacgaggcggtgcgcgcggtctcggat
cgcccggagccggcggtgttcctgctctggggcgcgcaggcgcgggccagggccgcgctg
atcgacgcggaccgccacggcgtgttcgagagcggtcacccctccccgctcaaccgcgcc
cgggacttccccggttccgacccgttcggccgggccaaccgctggctcgccgcgcagggg
cgccgcccgatcgactggcgcctcggctga
DBGET
integrated database retrieval system
