Methylobacterium sp. XJLW: A3862_27580
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Entry
A3862_27580 CDS
T05508
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A3862_27580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_27580
Enzymes [BR:
metx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
A3862_27580
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A3862_27580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AWV18840
LinkDB
All DBs
Position
6065303..6067003
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AA seq
566 aa
AA seq
DB search
MPLVPPPRPAAQPAADIPPTRVLNANQPEWSVGELAGALKRTLEDAFGHVRLRGEISGYR
GQHGSGHAYFSLKDGQARIDAVVWKGVFGRLRQRPQEGLEVVATGRITTFPGKSSYQIVI
ENLEPAGLGAWMALLEERKKLLAAEGLFAPEHKRPIPYLPQVVGVVTSPTGAVIRDILHR
LEDRFPRPVLVWPVRVQGDGAAEEVAAAIRGFNALPAGGAIPRPDVLIVARGGGSIEDLW
AFNEECVVRAAFESAIPLISAVGHETDTTLIDYVSDRRAPTPTGAAEMAVPVRADLIATV
ADLSARGRGAVGRRIDRDRSDLRALGRALPSADALLAAKRQRLDLAEARLAPALAAGASR
HRARLQLLLDRMARRSPDVVLANARARLARIDHRPLNALRNDVQRKGEALIQLGRRLVVA
REAGLERARALQARHTDRLHALSERLAQAGARSIERRRDRLDGLAGLLGSLSYRAVLDRG
YVLVRDAAGLPMRRAADAAAATRLSLQFADGTVTAVPDGTADPSGTSDPSPSAKPARRGG
AASPATSGRRTGTRPAPTRQGSLFDA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgtgccgcccccgcgccccgcagcccagcccgcggcggatatcccgccgacc
cgcgtgctcaatgccaaccagcccgaatggtcggtgggcgaactggccggtgccctgaaa
cgcacgctggaggacgccttcggccatgtccgcctgcgcggcgagatctcgggctatcgc
ggccagcacggctcgggccacgcctatttctccctgaaggacgggcaggcgcggatcgac
gcggtggtctggaagggtgtgttcggccgcctgcgccagcgcccccaggaggggctggag
gtcgtcgccaccggtcgcatcaccacctttcccgggaagtcttcctatcagatcgtcatc
gagaacctggagccggcgggtctcggggcctggatggctcttctggaggagcgcaagaag
ctgctcgccgccgaggggctgttcgcccccgagcacaagcggcccatcccctacctgccg
caggtcgtcggcgtcgtcacttcgccgaccggcgcggtgatccgcgacatcctccacagg
ctggaggaccggttcccgcggcccgtcctggtctggccggtgcgggtccagggcgacggc
gcggccgaggaggtcgcggccgcgatccgcggcttcaacgcgcttccggcgggcggcgcg
atcccgcgcccggacgtgctgatcgtcgcccgtggcggcggctccatcgaggatctctgg
gccttcaacgaggaatgcgtcgtccgcgccgccttcgagagcgcgatcccgctgatctcg
gcggtcgggcacgagaccgacaccacgctgatcgactacgtgtccgaccgccgggcgccg
accccgacgggcgccgccgagatggcggtgccggtccgcgccgacctgatcgccacggtg
gcggacctctccgcccgtggcagaggggcggtcgggcgccggatcgaccgcgaccggtcg
gatctgcgcgccctcggacgtgctctgcccagtgccgacgccctgctggcggccaagcgc
cagcggctcgacctcgccgaggcgcgcctcgccccggccctcgcggcgggcgccagccgc
catcgcgcgcggctccagctcctcctcgaccggatggcccggcgctcgcccgacgtggtc
ctcgccaacgcccgcgcgcggctggcgcggatcgaccaccggccgctcaatgccctgcgc
aacgacgtccagcgcaagggcgaagccctgatccagctcgggcggcgcctcgtcgtcgcg
cgggaggccggcctggaacgggcccgggcgctgcaggcgcgccacaccgaccgcctgcac
gcgctgtcggagcgcctcgcccaggccggggcgcgcagtatcgagcgccgccgcgaccgt
ctggacgggctggcgggcctgctcggttcgctcagctaccgcgccgtgctcgaccgcggc
tacgtgctggtgcgcgatgccgcggggctgccgatgcgccgcgccgcggatgcggcggcg
gccacccgcctcagtctgcaattcgccgacgggaccgtgacggccgtgcccgacgggacg
gccgatccgtccgggacgtccgatccatccccgtcggcgaagcccgcgcgtcgcggcggc
gcggcctcgccggcaacgtcgggcaggcggaccggtacgcgccctgccccgacgcggcag
ggctcgctcttcgacgcctga
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