Methylobacterium sp. XJLW: A3862_30145
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Entry
A3862_30145 CDS
T05508
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
metx
Methylobacterium sp. XJLW
Pathway
metx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3862_30145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_30145
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3862_30145
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A3862_30145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
Helicase_C
UvrB_inter
UvrB
ResIII
DEAD
AAA_22
UB2H
AAA_30
DUF87
NPHP3_N
PspAA
PAC2
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AWV19896
LinkDB
All DBs
Position
unnamed1:129989..131965
Genome browser
AA seq
658 aa
AA seq
DB search
MSTDVFILHSQYTPAGDQPEAIARLIAGVEEGAHHQTLKGITGSGKTFTMANIIHRLKRP
TLILAPNKTLTSQLYDEMRRFFPENAVEYFVSYYDYFQPEVYLPGRDEFIPKDSSINEHL
ERLRLSTTKSLIERRDTIVVASVSSIYGMGDPDNYRALQVPLTEGARLGQEELFRSLARL
QYDRAEHKLKRGTYRADGDAVEIYPADSEYKALRVGLANGVIASLQWFDAATGKPMESAD
HYLVSPKTVLAATADQARKAATAILEELETQVERLTSENRLTEAARLYDRITNDAEMLRE
VGYCSGMENYACYLSGRDPALPPITLLDYLPKDGLLFVDESHVMIPQISAMFRGDQARKD
TLIDYGFRLPSSKDSHPLSFHEFEQVKPQTIFVSATPGAYEVKASQGRVVEQIVRPTGLL
DPKVEVRPSQGARDDLLREIAQRTQRDERVLVTTLTKVATEELHAFLESEGIRARYMHSD
IKVEDRVAIIEGLRVGEFDVLIGISLLREGLDIPEASLIAIFDADRAGFLRSAQALIQMI
GRVARNVNGTAVLYADMVTPAMRAAIDETESRRQRQIAFNEENDVTPLSSVRGLASAQPY
GQEPSVHSEAFCENLYELCDRITEKEQALLAAVDHGQEDRAETIRGELDGLYRQFIYL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccgatgttttcatactgcactcgcaatacacgccggcaggcgatcagcccgaa
gcgatcgcgcgcctgatcgccggcgtcgaagagggggcacatcaccagaccctcaagggc
atcacgggctcgggcaagaccttcacgatggcgaacatcatccatcgtctgaagcgcccc
accttgatccttgcccccaacaagacgctgacatcgcagctctatgacgagatgcggcga
tttttccctgaaaacgccgtggagtatttcgtctcctattacgactatttccaaccggaa
gtgtatctgccgggccgcgatgagttcattccgaaggattcctcgatcaacgagcatctg
gaacggttgcgcctgtcgacgacaaaatcgctgatcgagcgccgcgatacgatcgtcgtc
gcctcggtatcgtcgatctacggcatgggcgatcccgacaattatcgcgcgctccaggtt
ccgctgaccgagggcgcgcggttgggacaggaagagcttttccgcagcctggcgcgcctg
caatatgatcgggccgagcataagctgaagcgcggcacttatcgcgctgatggcgacgct
gttgagatttacccggcggattcggaatataaggcgctgcgcgtcggtttggcaaacggc
gtgatcgcgtcgctccaatggttcgatgcggcgaccggcaagccgatggaaagcgccgat
cactatcttgtctcgcccaagactgttctggcggcgaccgcagatcaggcccgcaaggcc
gccacggcgatcctcgaagagttggaaacgcaggtcgaacggctgaccagcgaaaaccgc
ctgacggaagcggcgcgcctctatgatcgcatcaccaacgatgccgagatgttgcgcgag
gtcggatattgctcgggcatggaaaattacgcctgctatctgagcggtcgtgaccctgcg
ctcccgcccataaccctgctcgactatctgcccaaggacgggctgctgttcgtcgacgaa
tcgcatgtgatgatcccacagatctcggcgatgttccggggcgaccaggcccgcaaggat
acgctgatcgattatggcttccgcctgccgtcttcgaaggacagccaccccctgagcttc
cacgagttcgaacaggtcaagccgcagacgatcttcgtgtccgccacccccggcgcttat
gaggtaaaggcctcgcaaggcagggtggttgaacagatcgtgcggccgaccggcctgctc
gatccgaaggtggaagtccgcccgtcccaaggcgcgcgtgacgatttgctacgcgagatc
gcgcagcgcacgcagcgcgatgagcgcgtgctggttacgacgctgaccaaggttgcgacc
gaggagctgcacgctttcctcgaaagcgaaggcattcgcgcgcgttacatgcactctgac
atcaaggtcgaggatagggtcgcgatcatcgagggcctgcgcgtgggcgagttcgacgtg
ctgatcgggatcagtttgctgcgcgaagggctcgacatcccagaagcgtcgctgattgcg
atcttcgatgcagaccgcgcgggcttcctgcgctcggcccaggcgctgatccagatgatc
ggccgcgtcgcgcgcaatgtgaacggcaccgctgtcctctacgccgatatggtgacgccg
gcgatgcgggccgcgatcgatgagaccgagagccggcgacagcgccagatcgccttcaac
gaggagaacgacgtcacaccgctctcgtcggttcgcggcctggcgtcggcgcagccctac
gggcaagagccgtcggtccattcggaagccttctgcgagaacctgtacgagctttgcgac
cggatcacggagaaggaacaggcgctgctcgcggcggtggatcacggccaagaggatcgg
gccgagacgatccggggcgagctggacggcctctaccgtcagttcatttatctgtga
DBGET
integrated database retrieval system
