Phytobacter sp. MRY16-398: MRY16398_04890
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Entry
MRY16398_04890 CDS
T05735
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRY16398_04890 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mety03021
]
MRY16398_04890 (rpoA)
03400 DNA repair and recombination proteins [BR:
mety03400
]
MRY16398_04890 (rpoA)
Enzymes [BR:
mety01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MRY16398_04890 (rpoA)
Transcription machinery [BR:
mety03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MRY16398_04890 (rpoA)
DNA repair and recombination proteins [BR:
mety03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MRY16398_04890 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BBE75433
LinkDB
All DBs
Position
513731..514720
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtacttcatgagtacagcaccaaagaaggcgttcaggaagatatccttgaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgatgttattctt
actctgaataaatctggcattggccctgtgactgcagccgacattacccacgacggtgat
gtcgaaatcgtcaagccgcagcacgtgatctgccacctgaccgatgagaacgcgtctatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gccaccattctggctgaacaactggaagctttcgttgatttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctc
accgagattaaagatgtgctggcctcacgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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