Phytobacter sp. MRY16-398: MRY16398_06040
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Entry
MRY16398_06040 CDS
T05735
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mety03016
]
MRY16398_06040 (truB)
Enzymes [BR:
mety01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MRY16398_06040 (truB)
Transfer RNA biogenesis [BR:
mety03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MRY16398_06040 (truB)
Prokaryotic type
MRY16398_06040 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBE75548
UniProt:
A0A348D7T1
LinkDB
All DBs
Position
633925..634872
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AA seq
315 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRLFNANRAGHTGALDPLATGMLPVCLG
EATKFSQYLLDSDKRYRVVAKLGQRTDTSDADGQIVEERPVDFSAEQLAAALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVIYLRRLAVSKYPAERMVTLEQLHELVAQAEQRDIPAAQLLDPL
LMPMDSPAADYPVVNLPLTSSVYFRNGNPVRTTGVPHEGLVRVTEGEEAKFIGMGEMDDE
GRVAPRRLVVEYPPV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgatgtgcacggcgtgctgttgctggataaaccg
caaggcgcatccagcaatgatgtactgcaaaaagttaaacgtctctttaatgccaatcgc
gccgggcatactggcgcgttggatcctctggcaacaggtatgctaccggtttgtctgggt
gaggcgacaaagttctcccagtatctgctggattctgacaagcgttaccgtgtggttgcg
aagctgggccagcgcaccgatacttctgatgctgatggtcaaatcgtcgaagagcgtccg
gtcgattttagcgctgagcaactggccgccgcgctggagacctttcgtggcgatatcgaa
caaataccctcaatgtattctgcactgaaatatcagggcaaaaagctgtatgaatacgcg
cgccagggtatcgaagttccacgtgaagcccgacctattacggtgtatgaactgttgttc
atccgccacgaaggcgatgaactggaactggaagttcactgctcgaaaggcacctatatt
cgtacaattgttgacgatctgggtgagaaactgggctgtggcgcacatgtgatttatctg
cgccgtctggcggtgagtaaatatcctgctgagcgaatggtgacgctggaacaattgcat
gagctggtcgcgcaagctgagcagcgtgatatcccggcggctcaattactcgatccgctg
ttaatgcccatggatagcccggcagctgactaccctgttgttaaccttccgttgacttcg
tcggtttacttccgcaacggtaatcctgtgcgaacaaccggtgtgccgcatgaaggtctg
gtgcgtgtcactgaaggtgaagaggcgaaatttatcggtatgggcgaaatggatgacgaa
gggcgtgttgctccgcgtcgtctggtggttgagtacccgccagtctaa
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