Phytobacter sp. MRY16-398: MRY16398_09140
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Entry
MRY16398_09140 CDS
T05735
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00260
Glycine, serine and threonine metabolism
mety00630
Glyoxylate and dicarboxylate metabolism
mety00670
One carbon pool by folate
mety00785
Lipoic acid metabolism
mety01100
Metabolic pathways
mety01110
Biosynthesis of secondary metabolites
mety01200
Carbon metabolism
Module
mety_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MRY16398_09140 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MRY16398_09140 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MRY16398_09140 (gcvP)
00670 One carbon pool by folate
MRY16398_09140 (gcvP)
Enzymes [BR:
mety01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
MRY16398_09140 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BBE75858
UniProt:
A0A348D8P1
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All DBs
Position
957155..960028
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AA seq
957 aa
AA seq
DB search
MTQTLSQLENRGAFIERHIGPDAQQQQEMLKTVGADSLNALIAQIVPKDIQLATPPQVGE
ATTEYAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVS
QGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADIH
PQTLDVVRTRAETFGFDVIVDDASKVLDHQDVFGVLLQQVGTTGEVHDYSALITELKARK
IMVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGR
IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRI
ASRIHRLADILAAGLQQKGLKLRHAHYFDTLCVEVADKAAVLARAQAAEINLRSDILNAV
GITLDETTTREDVQKLFAVVLGDAHGLDIDVLDKDVALDSRSVPAAMLRDDAILSHPVFN
RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPAE
QAEGYHHMINQLSDWLVKLTGYDALCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI
PSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLRAKAEQHAANLSCIMVTYPSTHGVY
EETIREVCEIVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQ
ASQVAILNANYIASRLKEAFPVLYTGRDGRVAHECILDIRPLKEETGISEMDIAKRLIDY
GFHAPTMSFPVAGTLMVEPTESESKAELDRFIDAMLAIRGEINRVKAGEWPLADNPLVNA
PHTQNELVAEWHHGYTREQAVFPAGVANKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacacagactttaagccagcttgaaaaccgtggcgctttcattgaacgtcacattggg
ccggatgctcagcaacagcaggagatgctgaaaacggttggcgcggattcgttaaacgca
ctgattgcccagatcgtgccgaaagatatccagcttgccacgccgccgcaggtgggtgaa
gccacgaccgaatacgccgcactggcggagctgaaagcgattgctggtcgcaacaagcgc
tttaagtcttacattggcatgggttataccgccgtgcaattaccgccggttatcctgcgt
aacatgctcgaaaaccctggctggtacactgcctatacgccgtatcagccggaggtgtca
caagggcgccttgaagccttactgaatttccagcaggtgacgctcgacctgactggcctc
gacatggcctcggcttctctgctggatgaagctaccgccgctgccgaagcaatggcgatg
gcaaagcgcgtcagcaaactgaaaaatgccaaccgtttctttgttgccgccgacattcat
ccgcaaacgctcgatgtggtgcgcacccgtgccgaaacctttggttttgacgttatcgtg
gatgatgccagcaaggtgctggatcatcaggatgtgtttggcgtgctgttgcagcaggtg
ggcacgaccggcgaagtgcatgactacagcgcactgattaccgagttgaaagcccgtaaa
attatggtcagcgtagccgccgattttatggcgctggtgttgttgaccgcgccgggcaaa
caaggggcagacattgtcttcggttctgcgcagcgcttcggtgtgccgatgggctacggt
ggcccgcatgcggcattctttgccgcaaaagatgaattcaaacgctcaatgccgggacgt
attatcggtgtctccaaagacgcggcgggcaataccgcactgcgtatggcgatgcagacc
cgcgagcagcatatccgtcgcgaaaaagcgaactccaacatctgtacttcgcaggtactg
ctggccaacatcgccagcctgtacgcggtgtatcacggtccggttggcctgaaacgtatt
gcgagccgtatccatcgtctggccgatattctggcggccggcctgcagcaaaaagggctt
aagctgcgtcacgcgcactactttgacaccctgtgcgtggaagtggccgacaaagccgcc
gtgctggcgcgtgcgcaagcggctgaaatcaaccttcgtagcgacattctgaatgccgtg
ggtatcacgctcgatgaaaccaccacgcgtgaagatgtgcagaaactttttgccgtcgtg
ctgggcgatgcgcacggactggacattgacgtgctggataaagacgtggcgctcgacagc
cgctctgtgcctgccgccatgctgcgtgatgatgcgatcctgagccacccggtctttaat
cgctatcacagcgaaaccgagatgatgcgttacatgcactctctggagcgcaaagatctg
gcgctcaatcaggcgatgatcccactgggatcttgcaccatgaagctgaacgccgcagcg
gaaatgattccgatcacctggcctgaattcgccgaactgcatccgttctgcccggcagaa
caagccgaaggctaccaccacatgatcaaccagctttccgactggctggtgaaactgacg
ggttacgatgccctttgtatgcagccgaactctggcgcgcagggggaatatgcgggcctg
ttggcgattcgtcactaccatgagagccgcaacgaaggccatcgcgatatctgtctgatc
ccaagctctgcacacggtaccaacccggcatccgcacagatggcaggtatgcaggtggtg
gtggtggcctgtgataaaaacggcaacatcgatctggccgatctgcgcgcgaaagcggaa
caacatgcggcaaatctctcttgcatcatggtgacctacccgtccacccacggcgtctac
gaagagactatccgtgaagtgtgcgaaattgtgcatcaatttggcgggcaggtttatctc
gacggcgcgaacatgaatgctcaggtggggattacctctccgggctttatcggtgcggat
gtgtcgcatctcaacctgcataaaaccttctgtattccgcacggcggtggcggtccgggt
atggggccgattggcgtgaaagcgcatctggcaccgttcgtaccgggccacagcgtggtg
cagattgaaggcatgctgacccgtcagggcgcggtatctgccgccccgtttggtagcgcg
tcgattctgccaattagctggatgtacatccgcatgatgggcgccgaagggctgaaacag
gcaagccaggtggcgattctgaatgccaactacatcgccagccgtctgaaagaggcattc
ccggttctctatacgggtcgcgatggtcgcgtggcgcatgaatgtattctcgacattcgc
ccgctgaaagaagagaccggtatcagtgaaatggatattgcgaagcgcctgattgactac
ggtttccatgcgccgaccatgtctttcccggttgcgggtaccctgatggttgagccgacg
gagtcagaaagcaaagcggaactggatcgctttattgacgcgatgctggccattcgtggc
gagatcaaccgcgtaaaagcaggcgaatggccgcttgccgataacccgctggtgaatgcg
ccacatacgcagaacgagctggtggcggagtggcatcacggttatacccgcgagcaggct
gtcttcccggcgggtgtagcgaacaagtactggccgacggtaaaacgtcttgatgacgtt
tacggcgaccgcaacctgttctgctcttgcgtgccgatgagcgaataccagtaa
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