Phytobacter sp. MRY16-398: MRY16398_09750
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Entry
MRY16398_09750 CDS
T05735
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00300
Lysine biosynthesis
mety00470
D-Amino acid metabolism
mety01100
Metabolic pathways
mety01110
Biosynthesis of secondary metabolites
mety01120
Microbial metabolism in diverse environments
mety01230
Biosynthesis of amino acids
Module
mety_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MRY16398_09750 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MRY16398_09750 (lysA)
Enzymes [BR:
mety01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MRY16398_09750 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BBE75919
UniProt:
A0A348D8V2
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All DBs
Position
1027871..1029133
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AA seq
420 aa
AA seq
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MPRPLTQTTTDLNAANLLRLPAEFGCPVWVYDAQIIRDQIARLTQFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYDPKTHPEDIVFTADVIDDATLVRVSELRIPVN
AGSVDMLAQLGQVSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALEVMQR
FNLKLIGIHMHIGSGVDYGHLEQVCGAMVRQVVEFGQDLQAISAGGGLSIPYHEGEEGVD
TDHYYSLWNAAREQVAKHLGHPVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHFVLIDA
GFNDLMRPSMYGSYHHITALAADGRDLTTVPRIDTVVAGPLCESGDVFTQQEGGKVETRA
LPAVTPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDKGVARLIRRRQTIEELLALEQV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcccactgacacaaaccacaaccgaccttaatgccgctaatcttcttcggttg
cctgctgaatttggctgcccggtctgggtttatgacgcgcaaattattcgcgatcagatt
gcccgcctgacgcagtttgatgtgatccgtttcgcgcaaaaagcctgctcgaacattcat
atcctgcgcctgatgcgtgagcagggtgtgaaggtggattccgtgtcgttaggggaaatt
gaacgtgcgctggccgcaggttacgacccgaaaacgcatccggaggatattgttttcacg
gcggacgtgattgatgacgcgacgctggtccgcgtgagcgagctgcgcattccggttaat
gccgggtcagtggatatgctggcacaactggggcaggtttcgcccggtcacccggtctgg
ctgcgcgttaaccccggcttcggtcatggccatagccagaaaaccaataccggtggcgaa
aacagcaagcacggcatctggtatagcgacctgcctgccgcgctggaagtgatgcagcgt
tttaacctcaaactgatcggcattcatatgcatattggttccggggtggattacggccac
cttgaacaggtgtgcggtgcgatggtgcgccaggtggtggaatttggccaggatctgcag
gctatttcggcaggcggcggtctctccattccttatcatgaaggggaggaaggggtggat
acggaccactattacagcctgtggaatgccgcacgtgaacaggtggcgaaacatctgggt
catccggtaaaactggagatcgaaccgggacgcttcctggtggcggaatccggggtgctg
gtggcacaggtgcgcagcgtgaaagagatgggcagccgccactttgtactgattgacgct
ggttttaacgatctgatgcgcccgtccatgtacggcagctatcaccacattaccgcactg
gcggcggacgggcgtgatttaaccaccgtgccgcgtatcgataccgtggtggctgggccg
ctgtgcgagtctggcgatgtgtttacccagcaggagggcggtaaagtcgaaacccgcgca
ctgcctgccgtgacaccaggggattaccttgtgctgcatgataccggggcttatggtgcc
tcgatgtcgtcgaactataatagtcgtccgctgctgccggaggtgctgtttgataagggc
gttgcacggctgattcgtcgccgtcagaccattgaagaactgctggcgctggagcaggta
taa
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