Phytobacter sp. MRY16-398: MRY16398_10540
Help
Entry
MRY16398_10540 CDS
T05735
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mety03016
]
MRY16398_10540 (truD)
Enzymes [BR:
mety01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MRY16398_10540 (truD)
Transfer RNA biogenesis [BR:
mety03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MRY16398_10540 (truD)
Prokaryotic type
MRY16398_10540 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBE75998
UniProt:
A0A348D931
LinkDB
All DBs
Position
1123756..1124805
Genome browser
AA seq
349 aa
AA seq
DB search
MTGFDQLTYLHGKPAASGLLKANPEDFVVIEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKDMPDLSAFQPEGCKVLEYARHKRK
LRLGALKGNSFTLVLREISNRDDVESRLQAIREGGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATAEE
RAELQTRVDDKALMITASMPGSGEWGTQGEALSFEQAAVADAPELQALLVREKVEASRRA
MLLFPQQLSWNWWDDVTVELRFWLPAGSFATSVVREIINTLGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcttcgaccagctaacctatttgcacggtaaacctgcggctagcggtttactg
aaagccaatccggaagatttcgtggttatcgaggacttaggcttcgaacccgacggtgaa
ggtgaacatattctggtgcgaattctgaaaaacggctgcaatacgcgctttgttgccgac
gcgctggcgaagttccttaaaatacacgcccgtgaagtcagctttgccgggcagaaagat
aaacacgcggtgaccgagcaatggctgtgcgcgcgcgtgccgggtaaagatatgccggac
ctgagcgcgtttcagccggaaggctgtaaagtgctggaatatgcccgccataagcgcaaa
ctgcgtttaggcgcgcttaaaggcaacagtttcacccttgtgctgcgcgaaatcagcaac
cgggacgacgtggaatcccgcctgcaggcaatccgcgagggcggcgtaccgaactatttt
ggtgcgcaacgttttggcatcggcggcagcaatctacagggggcgctacgttgggctcaa
agcgatgccccggtgcgcgatcgtaataagcgcagtttttggttgtcggcggcacgcagt
gcattgtttaatcagattgttagcgagcgcctgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattatcggggcgcggaagttggtttgtggcgaccgcagaagag
cgtgctgagctgcagacgcgcgttgatgataaagcgctgatgattaccgcctcaatgccg
ggaagcggcgaatggggaacgcagggcgaagcgctgtcatttgagcaggccgccgttgcc
gatgcgcctgagctgcaggcgttgctggtgcgtgaaaaggttgaggcgtcgcgccgcgca
atgttgctctttccgcaacaattaagctggaactggtgggatgacgtgaccgtcgagtta
cgcttctggctgccggcaggtagcttcgccaccagtgtggtaagggaaattatcaatact
ttgggtgattatgcgaatattgctgagtaa
DBGET
integrated database retrieval system
