Phytobacter sp. MRY16-398: MRY16398_12530
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Entry
MRY16398_12530 CDS
T05735
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mety03009
]
MRY16398_12530 (srmB)
Enzymes [BR:
mety01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MRY16398_12530 (srmB)
Ribosome biogenesis [BR:
mety03009
]
Prokaryotic type
rRNA helicases
MRY16398_12530 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Shikimate_DH
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
BBE76197
UniProt:
A0A348D9N0
LinkDB
All DBs
Position
complement(1319591..1320925)
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AA seq
444 aa
AA seq
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MTVTTFSELELDDSLLDALQEKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDLGFAQDIEHISGETRW
RKQTMLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNYEHKLELLK
HLLKQDGVTRSIVFVRKRERVHELAEQLRAAGINNCYLEGEMAQAKRVEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTGRAGRKGTAISLVETHDHLLL
QKIGRYVEEPLKIRVIDELRPTTRAPSEKMTGKPSKKVLAKRAEKKKEKEKEKPRVKQRH
RDTKNIGKRRKPSAAATEQQNNEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaactcgaactcgacgacagcctactggacgcgctccag
gagaaaggtttcacacgcccgaccgccatccaggccgccgccattccgcctgcgcttgaa
gggcgtgatgtacttggctcagcgccgaccggtacgggtaaaacggcggcatatttgctg
ccagcgttgcagcacctgctggacttcccacgtaagaaatccggcccgccgcgcattctc
atcctgacgccgactcgtgaactggcgatgcaggttgccgaccacgcccgcgagctggca
aaaaatacccacctggatattgccaccatcaccggcggtgtggcctatatgaaccacgcc
gaggtgttcagcgaaaaccaggatatcgtggtcgcaaccacaggccgactgctgcaatac
attaaagaagagaattttgactgccgtgcggtcgaaacattgatcctcgacgaagcggat
cgcatgctggatctgggctttgcgcaggacatcgagcatatttctggcgaaacacgctgg
cgcaaacagaccatgctgttttccgcaacgctggaaggtgaagcgatcaaagacttcgcc
gagcgtctgctggaagatccggttgaagtttctgcaacgccgtccacccgcgagcgtaaa
aagatccaccagtggtactaccgcgcagacaactacgaacacaagctggaattgctcaag
catttgctcaagcaagacggcgtgacccgttcaatcgtcttcgtgcgtaaacgcgagcgt
gtccatgaactggcggagcaattgcgtgcagcgggtatcaacaactgctatctcgaaggc
gagatggcacaggcgaaacgcgttgaaggcatcaaacgcctgaccgacggtcgcgttaat
gtgctggttgccaccgatgtcgccgcccgtggtatcgatattcctgacgtgagccatgtg
tttaacttcgatatgccgcgcagtggtgacacctatctgcaccgaatcggccgtaccggt
cgcgcgggacgcaaagggaccgcgatttcactggtcgaaacccacgatcatctgctattg
cagaagattggtcgctacgttgaagaaccgctgaaaatccgcgtgattgatgaactgcgc
cccactacgcgcgcaccgagcgaaaaaatgaccggtaagccgtcgaagaaagtgctggct
aagcgtgcagagaagaaaaaagagaaagaaaaagagaagccgcgcgttaaacagcgccac
cgcgataccaaaaatattggtaagcgccgtaagccaagcgccgccgcgacagaacaacaa
aataacgaagaataa
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