Phytobacter sp. MRY16-398: MRY16398_30410
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Entry
MRY16398_30410 CDS
T05735
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MRY16398_30410
Enzymes [BR:
mety01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
MRY16398_30410
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
KhtT_N
PAS_10
Motif
Other DBs
NCBI-ProteinID:
BBE77985
LinkDB
All DBs
Position
3155548..3157539
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AA seq
663 aa
AA seq
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MRDDQEQNLLFRYLGSSSPFWRLTADSNALHFAPDEDSESSQVVTLNDEQATQLRQMTVI
TSSLTMHISLFGDNVPVHLVGRKINKTEWAGTASAWNDTSSVARDLVQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLCEEYTGLKEQEVIGQNVFKLFMSHNEAEASKRNISEFFRNG
ASYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHELISNAIDNRGDTQIGIVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEGQTLARLGGDEFIVLATDSSQSALEAMASRIITRLRQPFRIGLIEIYTGCSLGI
SLAPQHGNDRESIIRNADTAMYIAKENGRGKFCVFTPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKVTWRGEVRSLEALVRWQSPERGLIPPQDFIAYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQSIFSDLKQALHDLNFEYCPIDVELTESCLIENA
DLALSVIQQFSDLGSQVHLDDFGTGYSSLSQLARFPIDAIKLDQSFVKDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAVFERWYKRYQAR
KKG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgatcaggaacagaatctactgtttcgttacctgggttccagcagcccattc
tggcgattgaccgctgacagcaacgcattacatttcgctcctgatgaagactctgagtca
agtcaggtggtgacacttaatgatgagcaggcaacacagctacgacaaatgaccgttatt
acttccagcctgactatgcatatatctttatttggcgataatgttcccgttcatttagtt
ggccgcaaaatcaataaaaccgagtgggccggaaccgcgtcggcgtggaatgacacgtca
tctgtggcacgggatctggttcaagggctctcctttgctgaacaggttgtttccgaagcc
aattccgtaatcgtcatcctcgatcgccatggcaatatccagcgctttaatcgactttgt
gaagaatatacgggtttaaaagagcaagaggttatagggcaaaacgtttttaaactcttt
atgagccataacgaagccgaagcctctaaacgcaatatctctgaatttttccgtaacggc
gcttcttacgaagtcgaacgctggattaaaacgcgaaaggggcaacgtctgttcttattt
cgcaataaattcgtacacagcggcagcggaaaaaacgaaatcttccttatttgttctggc
accgatattaccgaagaacgtcgggcacaagagcgtttacgggttttagcgaataccgac
accattaccgggttgcccaatcgtaatgctattcatgagttaatcagcaacgcgattgat
aatcgtggcgacacgcaaattggtatcgtttacctggacctggataatttcaaaaaagta
aacgatgcctatggccatatgttcggcgaccaacttttacaggccgtggccctggcgatt
ttaagctgtctggacgaaggccagactctggcgcgcctgggaggtgatgagtttattgtc
ctggcgacagattcgtcgcaaagcgcgctggaggcgatggcttcgcgtattatcacccgt
ctgcgccagcccttccggattggcctaatcgagatttacaccggttgttcgttggggatt
tcccttgccccacagcatggtaacgatcgcgaaagcattattcgtaacgccgataccgcg
atgtatatcgcaaaagaaaacggacgtgggaaattctgtgttttcactcccgagatgaat
cagcgggttttcgagtatttatggcttgatactaacctgcgtaaagcactcgataatgac
caactggtgattcactatcagcccaaagtcacctggcgtggtgaagtgcgcagcctggaa
gccctggtgcgctggcagtcgccggaacgtgggttaattccgccgcaggattttattgcc
tatgcagaagaatcagggctgattgtgcccctggggcgctgggttatgctcgatgtcgtg
cgtcaggtcgcgaagtggcgtgataagggcatcaatttgcgtgtggcggtaaacgtctca
gcacggcagttagcagaccagtcgatattcagcgatttaaaacaggctttgcatgatctg
aattttgaatattgcccgatagacgttgaactgacagaaagttgtctgattgaaaatgcg
gatcttgcgctgtcagtgattcagcagttcagtgatttgggctctcaggtacatctcgac
gactttggtaccggttactcttccctttcacaactggcgcgttttcctatagatgcgata
aaactcgatcaatccttcgttaaggatatccataagcagtctgtttcgcagtcgctggtg
cgggcgattgttgcggtcgcacaggcgctgaatttacaggtgatagccgaaggggttgaa
aatgcgaaagaagacgccttccttaccaagaacggcgtcaacgaacggcagggattttta
tttgctaaacccatgcccgctgccgtattcgagcgatggtataagcgctatcaggcgcgg
aaaaagggctag
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