Phytobacter sp. MRY16-398: MRY16398_38090
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Entry
MRY16398_38090 CDS
T05735
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mety01002
]
MRY16398_38090
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
MRY16398_38090
Peptidases and inhibitors [BR:
mety01002
]
Cysteine peptidases
Family C82
MRY16398_38090
Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MRY16398_38090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BBE78753
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All DBs
Position
complement(3922464..3924323)
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AA seq
619 aa
AA seq
DB search
MLLKKSYGRRMSTLSLCLAFAFAPLFSAQALADEPEVVPVDSSATLGDQPTALSQPLEQS
PATAMMAGLQPYPAADAPANARSALQALLPANWTPVYMDSLSALYAAREMKPMWDNRDAV
QAFQQQLAEVAIAGFQPQFTTWVGLLTDPNISGMARDLVLSDAMMGYLHFVAGIPVKGNR
WLYSSKPYTLETPPLSVINQWQLALDKGNLPQFIETLAPHHPQYAAMHQSLLTLVADNSP
WPQLTSTVSLRPGQKSRDVPALREILQRSGMMDDAPKIALPGDDATSSVVSPSAIAVDTA
GTTTAQLTKKAKPASTLSSDYDRQLVAAVKRFQAAQGLHADGVIGQSTRDWLNVTPAQRA
GVLALNIQRLRLLPGKLSTGIMVNIPEYSLVYYLNGNQVLASRVIVGRPDRKTPMMSSAL
NNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVLRGWNSKEAIDPTMVDWATITP
SNLPFRFQQAPGAQNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASE
LANMLLQDAGWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGEDGRTQYRTDIYNY
DLTARSGAQILAKAEQLIR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaagaaatcgtatggtcgtcggatgtcgacattgagtttatgtctggcattc
gcatttgctccgctgtttagcgctcaggccctggccgatgagcctgaggtggtaccggtt
gacagttccgcgacgcttggcgatcaacccacggcattatcgcagccgctggaacagtcg
cctgcgacggcaatgatggcaggcttgcagccttatccggcagcagatgcgcctgctaac
gcgcgtagcgcattgcaggcactcttgcctgctaactggacaccggtctacatggattcg
ctttccgcgttgtatgccgcgcgtgaaatgaagccgatgtgggataatcgtgatgccgtt
caggctttccagcaacaactcgccgaagtcgcgattgccggtttccagccgcaattcacg
acctgggttgggctgttgaccgatccgaatatctcaggaatggcgcgggatttggtctta
tcggacgccatgatggggtatctgcatttcgtcgccggtattccggtgaaaggcaaccgc
tggctctacagcagtaaaccttacacgctggaaacaccgccgctgtcggtaatcaatcag
tggcaattagcgttggataaaggcaacctgccgcaatttatcgaaacccttgcacctcat
catccgcagtatgctgcgatgcatcagtctttactgacgctggtggcagacaattcaccg
tggccgcagttgaccagtaccgtttcactgcgtcccggacagaagagcagggatgtaccc
gcgctgcgtgaaatcctgcaacgtagcggcatgatggatgatgcaccgaaaatcgcgctg
cccggcgatgatgcaacgagcagcgtcgtcagcccgtctgccatcgcggttgatacggcg
ggaacaacaacggcgcagttgaccaaaaaagcgaaaccagcaagtacgctcagcagcgac
tatgaccgccagttagttgccgcagtcaaacgcttccaggccgctcaggggctgcatgcc
gacggcgtgattgggcagtcgacccgcgactggttgaatgtaaccccagcccagcgcgcc
ggggttctggcgctgaacattcagcgtctgcgtttgctgccgggtaaactctccacgggg
attatggttaacatcccggagtattcgctggtctattatctgaacggcaaccaggtgctg
gcctcccgcgtgattgtcgggcgaccggatcgcaaaacgccgatgatgagcagtgcgctg
aataacgtggtggttaacccgccgtggaacgtaccaccgacgctggcacgcaaagacatt
ctaccgaaagtatggaatgacccaggctatctggaacggcatggttataccgtgctgcgt
ggctggaacagtaaagaggctattgacccgacgatggtggattgggcaaccatcacgcca
tctaatctgcctttccgcttccagcaggcgccgggcgcgcaaaactcgctcggccgctat
aagttcaatatgccgagttctgacgctatctatcttcatgacacacccaaccataatctt
ttccagaaagatgcgcgagcgttgagctcaggctgtgtgagggtgaataaagcctctgag
cttgccaatatgctattacaggatgcgggatggaacgacacgcggatttccgatgcatta
aaacaaggagatacccgttacgttaatatccgtcaaaatataccggtgaatctttattat
ttgaccgcatttgttggcgaagatggtcgtacccaatatcgtacagatatttacaattat
gatctgacggcgcgatctggcgcacaaatcctggcgaaagccgaacaattaatcaggtaa
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