Phytobacter sp. MRY16-398: MRY16398_39050
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Entry
MRY16398_39050 CDS
T05735
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00550
Peptidoglycan biosynthesis
mety01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MRY16398_39050
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mety01002
]
MRY16398_39050
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
MRY16398_39050
Enzymes [BR:
mety01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MRY16398_39050
Peptidases and inhibitors [BR:
mety01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
MRY16398_39050
Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MRY16398_39050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
BBE78849
LinkDB
All DBs
Position
complement(4034211..4035431)
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AA seq
406 aa
AA seq
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MDTWVAYMTHFSLFPRGLAAGAALIVLFSPSLYALEQAPEAPPVDARAWILMDYASGKVL
AEGNADEKLDPASLTKLMTSYVVGQALKAGKIHLTDIVTVGKDAWATGNPALRGSSLMFL
KPGDQVSVADLNKGVIIQSGNDASIAIADFVAGSQDSFVSLMNSYSQKLGLTNTTFKTVH
GLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNKIRQPNRNRLLWSTSMNVDG
MKTGTTDGAGYNLVASATMGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKP
DATFVNQRVWFGAQSEAKLGAGEAGSVTIPKGQLKNLKASYTLSEPQLTAPLKQGQVVGT
IDFQLNGQTIEKRPLIVMEAVEEAGFFGRMWDFVLMKFHQWFGWFA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgggtggcctatatgacgcatttttctttatttccacgcggcctggcggcg
ggagccgcattgatcgttctcttttcaccttctctgtatgcattggaacaagcgccggag
gctccgcctgttgatgcccgcgcatggatcctcatggattacgccagcggtaaggtgctg
gcagaagggaatgccgatgagaaactggaccctgccagcctcaccaaattgatgaccagc
tacgttgtcggccaggcgttgaaggcagggaagattcacctgaccgacatcgtgacggta
ggtaaagatgcctgggctaccggaaacccggcgttacggggctcttcactgatgttcctc
aagccgggggatcaggtctcggtggctgacctcaacaaaggggtcattattcagtctggc
aatgacgccagcatcgccattgccgatttcgtggcgggcagccaggattctttcgtcagc
ctgatgaacagctactcgcaaaagctcggcctgaccaacaccaccttcaagaccgtccac
gggctggacgcgccggggcagtttagtaccgcccgcgatatggcgttgctcggtaaggcg
ctgattcacgatgtgccggacgagtacgctatccacaaagagaaagagttcaccttcaac
aaaattcgtcagccgaaccgcaaccgtctgctgtggagtaccagcatgaacgttgacggg
atgaaaaccgggacaacggatggcgctgggtacaacctggtggcgtcggcaacaatgggc
gacatgcgcctcatttccgtggtactaggggcgaaaaccgaccgcatccgttttaacgag
tcggaaaagctgttgacctggggcttccgcttcttcgaaacggtcacgcctatcaagcca
gacgccacctttgtaaatcaacgcgtctggtttggcgcgcaaagcgaggcaaaactgggc
gcgggggaggccggttcggtcaccatcccgaaagggcaactgaaaaacctgaaagcctct
tataccttaagcgaaccgcagcttaccgcgccgcttaaacaggggcaggttgtcggcacc
attgattttcagcttaacggacagaccattgagaagcgcccgctgattgtgatggaagcg
gttgaagaggccggattctttggccggatgtgggattttgtgctgatgaaattccaccag
tggtttggctggttcgcctga
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