Phytobacter sp. MRY16-398: MRY16398_39910
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Entry
MRY16398_39910 CDS
T05735
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MRY16398_39910 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mety03400
]
MRY16398_39910 (uvrB)
DNA repair and recombination proteins [BR:
mety03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MRY16398_39910 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MRY16398_39910 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBE78935
LinkDB
All DBs
Position
complement(4134004..4136025)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHVESTIQR
FTVYPKTHYVTPRERIVQAMEEIKVELADRRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAMGETERRREKQQQYNEEHGITPQGLNKKVVDILSLG
ESLAKTKGKGRGKSRTPAQVEAAELALTPKALQQKIHELEGQMMQHAQNLEFEEAAKCRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccattcaaactgaattccgcttttcgtccctccggcgatcagccagaagct
attcgtcgcctggaagaagggctcgaagacggactggctcatcagactttgctgggcgtt
accggttcagggaaaacgttcaccgtggcgaatgtgattgccgatttacagcgcccgacg
atggtgctggcgccgaacaagacccttgcggcacagttgtatggcgaaatgaaagagttc
ttcccggataacgcggtggaatatttcgtctcttactacgactactatcagccggaagcc
tatgtgccgagttcggacacgtttattgaaaaagatgcctcggtgaacgaacacattgag
cagatgcgtctgtcggccaccaaggcgctgcttgaacgtcgggatgtgattgtggtggca
tcggtctccgcgatttacggcctgggcgatccggacctgtacctgaagatgatgctgcac
ctgacaaaagggatgatcatcgatcaacgctccatactgcgtcggctggcggagctgcag
tacacccgcaatgatcaggcgtttcagcgcggtacctttcgcgtgcgcggcgaagtgatc
gatatcttcccggcagaatcggacgatattgccctgcgcgttgagctgtttgatgaagaa
gttgagcgtctgtcgctgtttgatccgctgaccgggcacgttgagtcgaccatccagcgt
tttacggtctatcccaaaactcactacgtcacgccgcgtgagcgcatcgttcaggcgatg
gaagagatcaaggttgagctggccgaccggcgcaaagtgctgctggagaataataagctg
ctggaagaacagcggctgacccagcgcacccagtttgatctggaaatgatgaatgaattg
ggctattgctccggcatcgaaaactattcgcgctacctttccgggcgcgggccgggcgag
ccgccgccgacgctgtttgattaccttccggcggatggcctgctggtgattgatgaatcc
cacgtcaccattccgcaaattggcggtatgttccgcggcgaccgcgcgcgtaaagagacg
ctggtggagtacggtttccgtctgccgtcagcgctggataaccgcccactgaaattcgaa
gagttcgaagcgctggcaccgcaaaccatctatgtatcggcgacgccgggcaactatgag
ctggaaaaatccggtggcgatgtgattgaccaggttgtgcgcccgaccggcttgctcgat
ccgattatcgaagtgcgaccggtggcaacccaggtggacgatctgctctccgagatccgc
atacgcgctgccattaacgagcgcgtgctggtcacgacactgaccaaacgcatggcggaa
gatctgaccgaatatctggaagaacacggtgagcgggtgcgttacctgcactccgacatt
gatacggtcgaacgtatggagattatccgcgatctacgccttggcgagttcgatgtgctg
gtgggcatcaacttgttacgtgaggggctggatatgccggaagtgtcgctggtggcaatt
ctggatgcggataaagaagggttcctgcgttctgagcgttcgctgattcagaccattggt
cgtgcggcgcgtaacgtcaacgggaaggccattctctacggcgataaaattaccccatcc
atggcgaaggcgatgggggaaaccgagcgtcgtcgcgagaaacagcagcagtacaacgaa
gaacacggcatcaccccgcaggggttgaacaaaaaagtggtggatattctgagcctcggc
gaaagcctggcgaagaccaaaggcaaaggtcgcggtaaatcgcgcacaccggctcaggtg
gaagctgccgaactggcgttaaccccgaaagcgctgcagcagaaaattcacgagctggaa
gggcagatgatgcaacatgcgcagaatctggaattcgaagaggcggcgaaatgccgcgat
caactgcatcaactgcgggaattgtttattgccgcctcgtaa
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