Phytobacter sp. MRY16-398: MRY16398_47020
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Entry
MRY16398_47020 CDS
T05735
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00010
Glycolysis / Gluconeogenesis
mety00020
Citrate cycle (TCA cycle)
mety00260
Glycine, serine and threonine metabolism
mety00280
Valine, leucine and isoleucine degradation
mety00310
Lysine degradation
mety00380
Tryptophan metabolism
mety00620
Pyruvate metabolism
mety00630
Glyoxylate and dicarboxylate metabolism
mety00640
Propanoate metabolism
mety00670
One carbon pool by folate
mety00785
Lipoic acid metabolism
mety01100
Metabolic pathways
mety01110
Biosynthesis of secondary metabolites
mety01120
Microbial metabolism in diverse environments
mety01200
Carbon metabolism
mety01210
2-Oxocarboxylic acid metabolism
mety01240
Biosynthesis of cofactors
Module
mety_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mety_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mety_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mety_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MRY16398_47020 (lpdA)
00020 Citrate cycle (TCA cycle)
MRY16398_47020 (lpdA)
00620 Pyruvate metabolism
MRY16398_47020 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
MRY16398_47020 (lpdA)
00640 Propanoate metabolism
MRY16398_47020 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MRY16398_47020 (lpdA)
00280 Valine, leucine and isoleucine degradation
MRY16398_47020 (lpdA)
00310 Lysine degradation
MRY16398_47020 (lpdA)
00380 Tryptophan metabolism
MRY16398_47020 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MRY16398_47020 (lpdA)
00670 One carbon pool by folate
MRY16398_47020 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mety04147
]
MRY16398_47020 (lpdA)
Enzymes [BR:
mety01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MRY16398_47020 (lpdA)
Exosome [BR:
mety04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MRY16398_47020 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_2
HI0933_like
NAD_binding_8
Thi4
FAD_binding_3
AlaDh_PNT_C
DAO
FMO-like
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BBE79646
UniProt:
A0A348DJH9
LinkDB
All DBs
Position
complement(4901242..4902666)
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALATHGIVFGEPQTDIDKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVEGENGKTVINFDNAIIAAGSRPIELPFIPHEDPRVWDSTDALELKTVPKRLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISQKFNLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAQRYDAVLVAIGRVPNGKLLDAGQAGVEVDERGFIRVDKQ
LRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaatcaaaactcaggtcgtggtacttggggcaggcccggcaggttactct
gctgccttccgttgcgctgatttaggtctggaaaccgtcatcgtagaacgttacaacacc
ctcggcggtgtttgtctgaacgtcggttgtatcccttctaaagcgctgctgcacgtagcg
aaagttattgaagaagctaaagcgctggcgactcacggtatcgtatttggtgagccgcag
actgatatcgataaaatccgtacctggaaagagaaagttatcactcaactgaccggcggc
ctggcaggcatggcgaaaggtcgtaaagttaaagtggtcaacggtctgggtaaattcacc
ggtgcgaacaccctggaagttgaaggcgaaaacggcaaaaccgtgatcaatttcgacaac
gctatcatcgcagcgggttcccgtccgatcgaactgccgtttattccgcatgaagatccg
cgcgtatgggactccaccgatgcactggagctgaaaaccgttcctaaacgtctgctggtt
atgggcggcggtatcatcggcctggaaatgggtaccgtttaccatgcgctgggttcacag
attgacgtggttgaaatgttcgaccaggttatcccggctgccgataaagatatcgtgaaa
gtcttcaccaaacgcatcagccagaaattcaacctgatgctggaaaccaaagtgactgcc
gttgaagcgaaagaagacggtatttacgtttccatggaaggcaaaaaagcgcctgccgaa
gcacagcgttatgatgcagtgctggtcgctatcggtcgtgtaccgaacggtaaactgctg
gacgcaggccaggcgggtgttgaagttgacgagcgtggctttatccgcgttgacaaacaa
ctgcgtaccaacgtaccgcacatctatgctatcggcgatatcgtcggtcagccgatgctg
gcgcacaaaggtgttcatgaaggtcacgttgctgccgaagttatcgctggcaaaaaacac
tacttcgatccgaaagttatcccgtctatcgcatacaccgagccagaagttgcatgggtt
ggtctgactgagaaagaagcgaaagagaaaggcatcagctacgaaaccgccaccttcccg
tgggctgcttctggccgtgctattgcttctgactgcgcagacggtatgaccaaactgatt
ttcgacaaagagactcaccgcgtcatcggtggtgcgattgtcggtaccaacggcggcgag
ctgctgggtgaaatcggtctggctatcgaaatgggctgtgacgcagaggacatcgcgctg
actatccacgcgcacccgacgctgcacgagtctgttggcctggctgccgaagtgttcgaa
ggtagcatcaccgacctgccgaacccgaaagcgaagaaaaaataa
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