Phytobacter sp. MRY16-398: MRY16398_47300
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Entry
MRY16398_47300 CDS
T05735
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00470
D-Amino acid metabolism
mety00550
Peptidoglycan biosynthesis
mety01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MRY16398_47300 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MRY16398_47300 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
MRY16398_47300 (murD)
Enzymes [BR:
mety01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MRY16398_47300 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
Precursor biosynthesis
Amino acid ligase
MRY16398_47300 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Pyr_redox
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BBE79674
UniProt:
A0A348DJK7
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All DBs
Position
complement(4934851..4936167)
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AA seq
438 aa
AA seq
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MADYQGKKVVIIGLGLTGLSCVEFFRARGVTPKVMDTRVSPPGLDKLPEEVERYLGGLND
DWLLAADLIVASPGIALAHPSLSAAADAGVEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKSAGKNVGVGGNIGLPALMLLESACDLYVLELSSFQLETTSSLHAAAATILNV
TEDHMDRYPFGLQQYRAAKLRVYENAKVCVVNADDALTMPVRGADERCVSFGVDVGDYHL
NRQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAVGLPRASSLKALTTFTGL
AHRFQLALEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLKRYL
QGSNVRLYCFGRDGAELATLRPEITDQTQDMEQAMRLIATRVQPGDMVLLSPACASLDQF
KNFEQRGDVFTRLAQELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagattaccagggtaaaaaagtcgtcattattggtcttggtctgacgggactctcg
tgcgtggaatttttccgcgcgcgcggcgtaacgccgaaagtgatggatacccgcgtttcg
cctccggggttggataagctccccgaagaggtggagcgctatcttggtggtctgaatgat
gactggctgctggcggccgatctgatcgtcgcgagccctgggatcgctctggcgcatccg
tcgctgagcgcagcggcagatgcgggcgtagagatcgttggtgatattgagcttttttgc
cgtgaagcgcaggcgccgatcgtggcgatcaccgggtcgaatggcaaaagcacagtcacc
acgctggttggcgaaatggcgaaatccgccggcaagaacgtcggcgttggcggcaatatt
ggcctgcccgcgctgatgctgctggaatctgcctgcgatctttacgtgttggaactttcg
agcttccagcttgaaaccacatccagcctgcatgcagcggcggcgaccatcctcaacgtt
accgaagatcatatggacaggtatccgtttggtctccagcagtaccgtgcggcgaaactg
cgtgtttatgaaaatgcgaaggtttgcgtggtgaatgcagatgacgcgctgaccatgcca
gtgcgtggtgcggatgagcgctgcgtcagctttggcgtagatgtcggtgattaccatctc
aatcgccagcagggggaaacctggctgcgcgtgaaaggtgagaaggtgctgaacgttaaa
gaaatgaagcttagcggccagcacaattatacgaacgcgctggcggcgctggccctggcc
gatgccgtggggttaccgcgcgccagcagcctgaaagcgttgaccacgtttactggtctg
gcgcaccgcttccagttggcgctggagcacaacggcgtgcgctggattaacgattccaaa
gcgaccaatgtcggcagtactgaggcggcactgaacggcctgcatgtagatggcacgctg
cacctgctgctcggtggcgacggtaaatcggcagatttctctccgctgaaacgttatctc
caaggcagtaatgttcgcttgtattgctttggccgtgacggcgcagaactggctacgttg
cgtccggaaattaccgatcaaacacaggatatggaacaggcgatgcgcctgattgcgacg
cgtgtgcaaccgggcgatatggtgttgttatcacccgcctgcgccagccttgatcaattt
aagaattttgaacagcgtggcgatgtctttacccgcctggcgcaggagttaggttga
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