Phytobacter sp. MRY16-398: MRY16398_47650
Help
Entry
MRY16398_47650 CDS
T05735
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mety03021
]
MRY16398_47650 (rapA)
Transcription machinery [BR:
mety03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MRY16398_47650 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
BBE79709
UniProt:
A0A348DJP2
LinkDB
All DBs
Position
4978463..4981369
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPATGENRLYARSDSPVTRVMFNPGDT
VTSHEGWQLTVEDVKEENGLLAYTGTRLDTQETNVMLREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DADNPFETEQLVICSLDFVRRNKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIE
QLAERVPGILLLTATPEQLGLESHFARLRLLDPNRFHDFAQFVDEQQNYRPVADAVALLL
AGKRLNDTELNTLSDLIGEQDIEPLLQAANSDRDDAEAARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGICAAVFHEGMSI
VERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDKVHTDLINYLASPENT
DGFDDLIKACREQHDALKAQLEQGRDRLLEIHSNGGEKALALAESIEEQDDDTGLINFAM
NLFDIVGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFEREVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPPTP
IRLLVDKNGTNLATQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHTILQKGEAQVEKAAQ
ALIDAAKREADEKLSAELSRLEALKAVNPNIRDDELSAIESNRLQVLESLSQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacacttggtcaacgctggataagcgacacggaaagcgaactcggactgggt
acagtcgtagcgatggatgcgcgaaccgttactctgctttttcccgcgacgggagaaaat
cgtctgtatgcacgcagcgattcccccgttacacgcgtcatgtttaatcctggcgatacg
gtaaccagccacgaaggctggcagctgactgttgaagacgtaaaagaagaaaacggcctg
ctcgcctataccggtacgcgcctggatacgcaggaaaccaacgtcatgctgcgcgaggtc
tttctcgacagcaaactggtctttagcaaaccgcaagaccgcctgttcgccgggcaaatc
gaccgtatggaccgtttcgcgctgcgttatcgcgcgcgtaaatatcaaagtgaacagtac
cgtatgccgtggagcgggctgcgcggccagcgtaccagcctgatccctcaccaattgcat
atcgcccacgatgttggccgtcgccatgcgccacgtgtcctgctggcggacgaagttggc
ttaggcaaaaccattgaagccgggatgatcctccaccagcagttattgtctggtgccgcg
gaacgtgtgctgatcatcgtgccggaaacgctgcagcaccagtggctggtcgaaatgctg
cgtcgcttcaacctgcgctttgcgctgtttgatgacgaacgctatgccgaagcgcagcac
gatgccgacaacccatttgaaacggaacaactggtgatttgctcactggacttcgtgcgc
cgtaataaacagcgcctggagcacctgtgtgacgccgaatgggatttaatggtggtggat
gaagctcatcacctggtgtggagcgaagaggctccaagccgcgaataccaggccattgaa
cagcttgctgagcgcgtgccgggcattttgctgcttaccgcgacaccggagcaactcggc
cttgagagccactttgcgcgcctgcgcttgttggatccaaaccgtttccacgatttcgct
cagttcgttgatgaacaacagaactatcgcccggttgctgatgcggttgccttgttactg
gcaggcaaacgcctgaatgataccgagctcaatacgcttagcgacctgattggcgaacag
gacatcgagccgctgctgcaggccgccaacagtgaccgtgacgacgctgaggcagcgcgt
caggagctgatttcgatgctaatggaccgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaaaggcttcccgaaacgcgaactgcacaccatcaagctgccgcta
ccgacccagtatcaaacggcaattaaagtctccggcatcatgggcgcgcgtaaaagtgct
gaagaccgcgcccgcgatatgctctacccggaacagatctatcaggaattcgaaggcgac
agcggtacctggtggaacttcgatccgcgcgtcgaatggctgatgggctatctgaccagc
catcgttcacagaaggttctggtgatctgcgccaaagcggccaccgcgctgcaactggag
caggtcttgcgcgagcgtgaaggtatctgtgccgcagtgttccatgaaggcatgtcgata
gtagaacgtgaccgcgcggcggcctggtttagcgaagaagacagcggcgcgcaggtattg
ctgtgctctgaaatcggctccgaaggacgtaacttccagtttgccagccatctggtgatg
ttcgatctaccgttcaatccggatctgctcgaacagcgtatcggtcgtctggatcgtatc
ggccaggcgcatgacattcagatccacgtgccttatctggaaaaaacggcgcaatccgtg
ctggtgcgttggtaccacgaaggtctggacgcgttcgaacacacctgcccgacagggcgg
acgatttacgacaaggtccacaccgatctgattaattaccttgcatcgccggaaaatacc
gacggttttgatgacctcatcaaggcctgccgcgagcagcatgacgcgctgaaagcgcag
cttgagcaaggtcgggaccgtctgctggaaattcactcaaacggcggtgaaaaagcgctg
gctctggcagaaagcattgaagagcaggacgatgataccgggcttatcaatttcgccatg
aacctgttcgatatcgtcggtatcaaccaggacgatcgcggcgagaacatgattgtgctg
acgccatccgatcatatgctggtaccggattttccgggcctgccggaagatggctgcacc
atcacctttgagcgtgaggtggcactgtcccgcgaagatgcgcagtttattacctgggaa
catccgctgattcgcaacgggctggatctgatcctctctggcgataccggtagcagcacc
atttcattgttgaaaaataaggcgctgcctgtcggtacactgctgctggaactgatttat
gtcgttgaggcacaggcgccgaaacaactgcagcttaaccgcttcctgccgccgacgccg
attcgtctgctggtggataaaaacggcactaaccttgccacacaggtcgagttcgagagt
ttcaaccgtcagctcagcgcggttaaccgccacaccggcagtaagctggtgaacgccgta
cagcaggatgtacacaccattctgcaaaaaggtgaagcgcaggtcgaaaaagccgcacag
gcattgatcgacgccgcgaagcgcgaagcggatgaaaaactgtcagcggagctgtcgcgc
ctcgaagccctcaaagccgttaacccgaatattcgtgatgacgagctgagcgctattgag
agcaaccgcctgcaggtgctggaaagcctttctcaggcaggctggcgtcttgacgcgctg
cgtcttatcgttgtgacgcatcagtaa
DBGET
integrated database retrieval system
