Phytobacter sp. MRY16-398: MRY16398_49980
Help
Entry
MRY16398_49980 CDS
T05735
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
mety
Phytobacter sp. MRY16-398
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mety03000
]
MRY16398_49980 (treR)
Transcription factors [BR:
mety03000
]
Prokaryotic type
Helix-turn-helix
LacI family
MRY16398_49980 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_31
HTH_23
HTH_3
HTH_IclR
HTH_7
Peripla_BP_4
MarR_2
AAA_18
HTH_Tnp_ISL3
CENP-B_N
HTH_Crp_2
HTH_AraC
MarR
TrmB
HHH
HTH_26
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BBE79942
UniProt:
A0A348DKC5
LinkDB
All DBs
Position
5225534..5226481
Genome browser
AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVVNQHGFSPSRSARAMRGQ
SDKVVAIIVSRLDSLSENLAVQTMLPTFYEQGYDPIMMESQFSPDLVEEHLHMLRRRNID
GVVLFGFTGVTEKLLSSWRASLVLLARDAKGFASVCYDDEGAINLLMQNLYDQGHRHISF
IGVPHSDITTGKRRHEAYLAFCERHQLTPNFILPGLAMKHGYDNVASVLTPDTSALLCAT
DTLALGASKYLQEQRIDNLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAAAQLIDQVN
GRTDPRQIVIPAHLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgacgatcaaagacattgcgcgtttaagtggcgttgggaaatcaacg
gtgtctcgcgtgctgaataatgaaagcggtgtaagcgaacgtacccgcgaacgcgtggaa
gcggtggtcaatcaacacggtttttcaccttcccgttccgcacgcgccatgcgcggtcag
agcgataaagtggtggccatcattgtctcccgtctcgattctctttcggaaaacctggcc
gtccagaccatgctccctaccttctatgaacagggttatgacccgatcatgatggaaagc
cagttctcgccggatttggtcgaagaacatctgcatatgctacgccgccgcaatattgat
ggcgtcgtgctgtttggctttaccggcgtcacggagaagctgttatcctcgtggcgcgcc
tcgctggtcctgctggcacgggatgccaaagggttcgcctccgtctgctatgacgacgaa
ggggccataaacctgctgatgcagaatctctacgatcagggccatcgccacattagtttt
attggcgtaccgcacagcgatatcaccacgggcaagcgtcgccacgaggcctatctggcg
ttttgcgagcgccatcaactcacccccaatttcattttgccgggtctcgcgatgaaacat
ggctacgataacgtcgccagcgtgttgacgcccgacaccagcgccctgctctgtgcaacg
gacacccttgccctgggagccagcaaatatttgcaggaacagcgcattgataatctgcaa
ctggcgagcgtggggaatacaccgttgatgaaatttctccacccggagatcgtcaccgtt
gatcccggctatgccgaagcaggccgccaggccgcggcgcaactgatcgatcaggtcaat
ggccgcaccgatccacgtcaaattgtgatccccgcccacctcgcctga
DBGET
integrated database retrieval system
