Phytobacter sp. MRY16-398: MRY16398_50450
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Entry
MRY16398_50450 CDS
T05735
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00230
Purine metabolism
mety00240
Pyrimidine metabolism
mety01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
MRY16398_50450 (cpdB)
00240 Pyrimidine metabolism
MRY16398_50450 (cpdB)
Enzymes [BR:
mety01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
MRY16398_50450 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
MRY16398_50450 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
BBE79989
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All DBs
Position
5277421..5279364
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AA seq
647 aa
AA seq
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MIKFSATLLATLIAASVQAATVDLRIMETTDLHSNMMDFDYYKDSATEKFGLVRTASLIN
AARKEVKNSVLVDNGDLIQGSPLGDYMAAKGLKKGDIHPVYKALNTLDYAVGNLGNHEFN
YGLDYLHRALEGAKFPYVNANIIDVKTQKPLFTPYLIKETAVTDTDGKTHTLKIGYIGFV
PPQIMVWDKANLSGKVTVNDITETAKKYVPEMREKGADLVVLVAHSGLSSEPYQAMAENS
VYYLSEVPGVDAILFGHAHAVFPSKDFAAIKGADIAKGTLNGVPSVMPGMWGDHLGVVDL
VLNNDAGKWQVASSKAEARPIYDAAAKKSLAAEDSKLVEILKHDHDATRQFVGKPIGKSA
DNMYSFLSLVQDDPTVQVVNNAQTAYVKHFIQGDPDLANLPVLSAAAPFKAGGRKNDPAS
FVEVEKGQLTFRNAADLYLYPNTLVVVKATGKEVKEWLECSAGQFNQIDINSTKPQSLIN
WETFRTYNFDVIDGVKYQIDVTQPARYDGECQSINPQAERIKDLTFNGKPIDPNQVFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRAVLAKWITDESAKAGEIHPAADNNWRLAPIHS
NTALDIRFETSPSEKAAAFIKEKAQYPMKKVGTDEIGFALYQVDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagcgcaacgctccttgccacgttgatagcagccagcgtacaagcggcg
acggtggatctccggattatggaaaccactgatttgcatagcaacatgatggactttgat
tactataaagattctgcgacagaaaaatttggcctggtgcgtaccgccagcctgatcaat
gccgccagaaaagaagtcaaaaatagcgtgctggtggacaacggcgacttaattcagggc
agcccgctcggtgattatatggcagccaaagggctgaaaaagggcgacatccaccctgtc
tataaggcgctgaatacgctggactacgccgtgggcaacctcggcaatcacgaattcaac
tatggcctggattatttgcaccgggcgctggaaggggcaaaattcccctacgtgaatgcc
aacattatcgatgtcaaaacccaaaagccgctgtttaccccgtatctcattaaagagacc
gccgttaccgataccgatggtaaaacgcatactctgaagattggctatatcggctttgtc
ccaccacaaatcatggtgtgggataaagccaacctgagcggcaaagtcacggttaatgac
atcaccgaaacggcgaagaaatatgtgccagagatgcgcgaaaaaggggccgacctggtg
gtactggttgcccactccggcctctcttctgaaccttatcaggcgatggcggaaaactcc
gtctactacttaagcgaagtccccggcgttgacgctattctgtttggccatgcccatgcg
gtcttcccgtcaaaagatttcgccgccattaaaggagcggatatcgccaaaggaacctta
aatggcgtgccgtcagtgatgccaggaatgtggggcgaccacctcggcgtggtggatctg
gtattgaataacgatgccgggaagtggcaggtcgcttcgtcaaaagccgaagcgcgcccg
atttatgatgccgccgccaaaaaatcgttggccgcagaagacagcaaactggtggaaatc
ctgaaacacgaccacgatgccacccgtcagttcgtcggcaagcctatcggaaaatccgcc
gacaacatgtacagcttcctctcccttgtacaggatgacccaaccgtccaggtcgtcaac
aacgcccagaccgcttatgtgaagcactttattcagggcgatccggatctggcgaacctg
ccggtcttatctgccgccgccccgttcaaagcaggcggacgtaaaaacgatccggccagt
tttgtcgaggtcgaaaaagggcagctcaccttccgtaacgccgccgatctgtatctttac
cccaacacactggtggtcgtgaaagcgacgggcaaagaggtgaaagagtggctggagtgc
tccgccgggcagtttaatcagatcgatatcaacagcacgaagcctcagtcactcatcaac
tgggagaccttccgtacctataacttcgatgtgattgatggggtgaaataccagattgat
gtgacgcagcctgctcgttatgacggcgagtgccagagcatcaacccgcaagctgagcgt
attaaagatctgacctttaacggcaaaccgatcgatcccaaccaggtgttcctggtggca
accaataactaccgcgcctatggcggtaagtttgcgggaacgggtgacagccatatcgcc
tttgcctcgccggatgaaaaccgcgcggtgctggcaaaatggataaccgacgaatcggca
aaagcgggagaaatccacccggcagcggataacaactggcgcctggcgccgattcacagt
aatacggcgctggatatccgtttcgaaacctcaccttctgagaaggcggctgcgtttatc
aaagagaaagcgcagtacccgatgaagaaggtcggtacggacgagattggctttgcgctc
tatcaggtggatttaagtaagtaa
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